Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   MHH65_RS06855 Genome accession   NZ_CP152026
Coordinates   1351827..1352399 (+) Length   190 a.a.
NCBI ID   WP_024426871.1    Uniprot ID   -
Organism   Bacillus sp. FSL L8-0654     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1346827..1357399
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MHH65_RS06825 (MHH65_06825) dapD 1346942..1347652 (+) 711 WP_342497900.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  MHH65_RS06830 (MHH65_06830) - 1347735..1348865 (+) 1131 WP_098676853.1 N-acetyldiaminopimelate deacetylase -
  MHH65_RS06835 (MHH65_06835) - 1348916..1349158 (+) 243 WP_024424725.1 YkuS family protein -
  MHH65_RS06840 (MHH65_06840) - 1349181..1349990 (-) 810 WP_024426870.1 mechanosensitive ion channel family protein -
  MHH65_RS06845 (MHH65_06845) ahpA 1350262..1350804 (+) 543 WP_003211758.1 biofilm-specific peroxidase AhpA -
  MHH65_RS06850 (MHH65_06850) - 1350887..1351345 (+) 459 WP_024424727.1 TlpA disulfide reductase family protein -
  MHH65_RS06855 (MHH65_06855) rok 1351827..1352399 (+) 573 WP_024426871.1 transcriptional regulator Rok Regulator
  MHH65_RS06860 (MHH65_06860) - 1352447..1353364 (-) 918 WP_024426872.1 hypothetical protein -
  MHH65_RS06865 (MHH65_06865) - 1353450..1354031 (+) 582 WP_024426873.1 molybdenum cofactor guanylyltransferase -
  MHH65_RS06870 (MHH65_06870) - 1354062..1355078 (+) 1017 WP_024426874.1 thiazole biosynthesis adenylyltransferase ThiF -
  MHH65_RS06875 (MHH65_06875) glp 1355088..1356365 (+) 1278 WP_024426875.1 gephyrin-like molybdotransferase Glp -
  MHH65_RS06880 (MHH65_06880) mobB 1356347..1356871 (+) 525 WP_024424784.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  MHH65_RS06885 (MHH65_06885) - 1356868..1357359 (+) 492 WP_024426876.1 molybdenum cofactor biosynthesis protein MoaE -

Sequence

Protein


Download         Length: 190 a.a.        Molecular weight: 21543.50 Da        Isoelectric Point: 9.7309

>NTDB_id=985566 MHH65_RS06855 WP_024426871.1 1351827..1352399(+) (rok) [Bacillus sp. FSL L8-0654]
MFNEREALRLRLEQLNEAEVKVIREYQIERDAIYAKLRELDRQGTGLVSDTKKEVRTERKTDSLPVLAELAAQEMRSYQQ
PAQPQSSSLGTGQLNGAPVGIPEGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTF
MQSLIKMYPEVKKPYRGQYILEGDIQTEDE

Nucleotide


Download         Length: 573 bp        

>NTDB_id=985566 MHH65_RS06855 WP_024426871.1 1351827..1352399(+) (rok) [Bacillus sp. FSL L8-0654]
TTGTTTAATGAGAGGGAAGCGTTACGTTTACGATTGGAACAATTAAACGAGGCAGAAGTAAAGGTCATCCGTGAATATCA
AATTGAGCGAGATGCGATTTATGCAAAATTAAGAGAATTAGACCGTCAAGGAACAGGTCTAGTGTCAGATACAAAAAAAG
AAGTACGTACAGAGAGAAAGACGGATTCACTGCCTGTATTAGCTGAGCTTGCTGCGCAAGAAATGAGAAGCTACCAGCAG
CCGGCACAACCACAATCATCATCTTTAGGAACAGGACAGCTAAACGGTGCGCCTGTAGGTATTCCTGAAGGATCGACAAG
ACGCAGAAGAGGCACAGCTCGTCCTGGCTCTAAGGCAGCGAAGCTTCGTGAAGCTGCGATTAAAACGTTAAAGCGTCATA
ATGCAGCGATTAAAAGCTCAGAGCTTCAAAAAGAGATCGAAAAAGAGAGCGGTCTTGAAATCCCAAATATGACAACGTTT
ATGCAAAGCTTAATTAAAATGTACCCTGAAGTGAAGAAGCCTTATCGCGGACAGTATATTTTAGAAGGCGACATTCAAAC
AGAAGACGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

81.283

98.421

0.8

Multiple sequence alignment