Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   MHH65_RS06655 Genome accession   NZ_CP152026
Coordinates   1320415..1320876 (-) Length   153 a.a.
NCBI ID   WP_008356877.1    Uniprot ID   -
Organism   Bacillus sp. FSL L8-0654     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1315415..1325876
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MHH65_RS06630 (MHH65_06630) - 1316017..1316901 (+) 885 WP_025092345.1 cation diffusion facilitator family transporter -
  MHH65_RS06635 (MHH65_06635) - 1316966..1317118 (-) 153 WP_162842519.1 hypothetical protein -
  MHH65_RS06640 (MHH65_06640) - 1317420..1317959 (+) 540 WP_024424707.1 RDD family protein -
  MHH65_RS06645 (MHH65_06645) - 1318085..1319395 (+) 1311 WP_024426856.1 MFS transporter -
  MHH65_RS06650 (MHH65_06650) - 1319469..1320377 (+) 909 WP_024424709.1 chemotaxis protein -
  MHH65_RS06655 (MHH65_06655) kre 1320415..1320876 (-) 462 WP_008356877.1 YkyB family protein Regulator
  MHH65_RS06660 (MHH65_06660) - 1321542..1322417 (+) 876 WP_255290947.1 replicative DNA helicase -
  MHH65_RS06665 (MHH65_06665) - 1322663..1322821 (+) 159 WP_176544433.1 hypothetical protein -
  MHH65_RS06670 (MHH65_06670) - 1322997..1323821 (-) 825 WP_098676841.1 hypothetical protein -
  MHH65_RS06675 (MHH65_06675) - 1324063..1324251 (+) 189 WP_241743572.1 XtrA/YqaO family protein -
  MHH65_RS06680 (MHH65_06680) - 1324606..1324830 (+) 225 WP_326355678.1 ArpU family phage packaging/lysis transcriptional regulator -
  MHH65_RS06685 (MHH65_06685) - 1325045..1325692 (+) 648 WP_098676843.1 hypothetical protein -

Sequence

Protein


Download         Length: 153 a.a.        Molecular weight: 17711.30 Da        Isoelectric Point: 10.2452

>NTDB_id=985565 MHH65_RS06655 WP_008356877.1 1320415..1320876(-) (kre) [Bacillus sp. FSL L8-0654]
MDDYAHTKDIEPTAENIAKAIYTVNRHAKTAPNPKFLYLLKKRALQKLLQEGKGRKVGLHFSNNPKYSQQQSDVLIEIGD
YYFHLPPTKEDFEFLPHLGNLNQSYRNPKANMSLNRAKQILQTYVGLKEKPAATKQKSHYTKPVFKRLGESYF

Nucleotide


Download         Length: 462 bp        

>NTDB_id=985565 MHH65_RS06655 WP_008356877.1 1320415..1320876(-) (kre) [Bacillus sp. FSL L8-0654]
ATGGACGATTATGCTCATACTAAAGACATAGAACCTACAGCAGAAAACATCGCAAAAGCCATTTATACTGTTAACCGCCA
TGCTAAAACCGCACCAAACCCCAAGTTTCTTTATCTTTTGAAAAAACGCGCGCTGCAAAAACTATTGCAAGAAGGTAAAG
GAAGAAAAGTGGGCCTACATTTCTCTAACAATCCCAAGTATAGTCAACAACAGTCCGACGTGCTGATTGAAATTGGAGAT
TATTATTTTCACCTGCCACCAACGAAAGAAGACTTCGAATTTTTGCCACACTTAGGAAATTTAAATCAATCATATCGCAA
TCCGAAAGCGAATATGTCATTAAACCGAGCAAAACAAATACTTCAAACGTATGTCGGTTTAAAAGAAAAACCTGCCGCCA
CAAAACAAAAATCACATTACACAAAGCCCGTCTTCAAACGTCTCGGGGAAAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

75.974

100

0.765

Multiple sequence alignment