Detailed information    

insolico Bioinformatically predicted

Overview

Name   pepF   Type   Regulator
Locus tag   MHH65_RS05585 Genome accession   NZ_CP152026
Coordinates   1124174..1126000 (+) Length   608 a.a.
NCBI ID   WP_283241882.1    Uniprot ID   -
Organism   Bacillus sp. FSL L8-0654     
Function   degradation of XIP; competence shut-off (predicted from homology)   
Competence regulation

Genomic Context

Location: 1119174..1131000
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MHH65_RS05565 (MHH65_05565) - 1119433..1120098 (-) 666 WP_034282060.1 TerC family protein -
  MHH65_RS05570 (MHH65_05570) mecA 1120363..1121028 (+) 666 WP_024425038.1 adaptor protein MecA Regulator
  MHH65_RS05575 (MHH65_05575) cls 1121116..1122636 (+) 1521 WP_098676816.1 cardiolipin synthase -
  MHH65_RS05580 (MHH65_05580) - 1122799..1123959 (+) 1161 WP_098676817.1 competence protein CoiA family protein -
  MHH65_RS05585 (MHH65_05585) pepF 1124174..1126000 (+) 1827 WP_283241882.1 oligoendopeptidase F Regulator
  MHH65_RS05590 (MHH65_05590) - 1126108..1126281 (-) 174 WP_024425034.1 hypothetical protein -
  MHH65_RS05595 (MHH65_05595) - 1126577..1127488 (-) 912 WP_024425033.1 ClpXP adapter SpxH family protein -
  MHH65_RS05600 (MHH65_05600) - 1127485..1127883 (-) 399 WP_098676818.1 thiol management oxidoreductase -
  MHH65_RS05605 (MHH65_05605) - 1128159..1128926 (-) 768 WP_098676819.1 lytic transglycosylase domain-containing protein -
  MHH65_RS05610 (MHH65_05610) - 1128948..1129526 (-) 579 WP_087975599.1 CYTH domain-containing protein -
  MHH65_RS05615 (MHH65_05615) - 1129762..1130127 (+) 366 WP_041110150.1 hypothetical protein -
  MHH65_RS05620 (MHH65_05620) - 1130161..1130790 (+) 630 WP_075622820.1 GTP pyrophosphokinase family protein -

Sequence

Protein


Download         Length: 608 a.a.        Molecular weight: 70171.90 Da        Isoelectric Point: 5.4474

>NTDB_id=985561 MHH65_RS05585 WP_283241882.1 1124174..1126000(+) (pepF) [Bacillus sp. FSL L8-0654]
MTSQNKNNHLPDRSEVKEENKWRLEDIFASVDAWNKEFEAVKKEIPKLAQFKGKLAHSADVLYEALTFQDQLSEKLGKLY
TYAHMKYDEDTTNSSFQALNDKASNLFTQLSSTSAYIVPEILSIQEDKLQQFILEKEELKLYSHALEEINKERPHILSEE
QEALLAEASEPLSSSSTTFSMFNNADISFPSVKDENGEEKKITHGNFITFLNSDDREVRKNAFKAVYKTYDQYKNTLAST
LSGSIKKDNFYAKVRNYKSAREAALSRNSIPEEVYDNLIDTVHQYLPLLHRYIELRKKVLKLDEVHNYDLYTPLVKDAGM
KLTYDEAKDYMLKGLAPLGEEYVSVLKEGLENRWVDVYENKGKRSGAYSSGSYGTNPYILMNWQNNIDNLFTLAHEFGHS
VHSYYTRKHQPYPYGNYSIFVAEVASTTNEALLGEYLLNHLDDKKQRLYVLNHLLEGFRGTVFRQTMFAEFEHLIHVKAQ
EGEALTPEFMTNLYYDLNKKYFGDGMVVDKEIGLEWTRIPHFYYNYYVYQYATGYSAAQALSKQILQEGKPAVERYTDFL
KAGSSDYPINVLKKAGVDMASKEPIEAACQLFEEKLKEMEELISKTGE

Nucleotide


Download         Length: 1827 bp        

>NTDB_id=985561 MHH65_RS05585 WP_283241882.1 1124174..1126000(+) (pepF) [Bacillus sp. FSL L8-0654]
ATGACTTCACAAAACAAAAACAATCATTTACCAGACAGAAGCGAAGTAAAAGAAGAAAACAAATGGCGTCTTGAAGATAT
TTTTGCAAGCGTCGATGCATGGAACAAGGAATTCGAAGCGGTCAAAAAAGAAATTCCGAAGCTGGCCCAGTTTAAAGGCA
AGCTGGCCCATTCTGCTGATGTTCTGTATGAAGCCCTCACCTTTCAGGATCAACTTTCTGAAAAGCTTGGCAAGCTTTAT
ACATATGCGCACATGAAATATGATGAAGATACAACGAACTCATCATTTCAGGCGTTAAATGATAAGGCATCGAATCTATT
TACACAGCTGTCTAGTACATCTGCTTATATTGTTCCAGAGATTTTATCGATTCAAGAAGATAAATTGCAGCAATTCATAC
TAGAAAAAGAAGAATTAAAACTGTATTCACATGCTCTCGAAGAAATTAATAAAGAGCGACCACATATTTTAAGTGAGGAG
CAAGAAGCTTTATTAGCTGAGGCATCTGAACCACTTTCATCTTCATCTACTACGTTTAGTATGTTTAACAACGCCGACAT
TTCGTTTCCTTCTGTAAAGGATGAGAATGGGGAGGAAAAGAAGATTACCCACGGCAACTTCATCACATTTTTAAATAGTG
ATGATCGTGAAGTGAGAAAGAATGCCTTTAAAGCTGTGTATAAAACGTATGATCAGTATAAGAATACACTTGCTTCTACA
CTGAGCGGTTCGATTAAAAAGGATAATTTTTATGCAAAAGTACGAAATTACAAATCGGCAAGAGAAGCAGCACTATCACG
AAACAGCATCCCGGAAGAAGTGTATGACAATCTAATTGATACAGTTCATCAATATTTACCGTTATTACACCGTTATATTG
AATTACGTAAAAAGGTATTAAAGCTTGATGAAGTGCACAATTACGACTTGTACACACCACTTGTGAAAGATGCTGGCATG
AAGCTCACCTATGATGAAGCAAAGGATTATATGCTGAAAGGGTTAGCCCCATTAGGAGAAGAATATGTGTCCGTGTTAAA
AGAAGGACTCGAAAATCGCTGGGTAGACGTTTATGAGAATAAAGGGAAACGAAGCGGTGCTTATTCATCTGGGAGCTATG
GTACAAATCCATATATCCTCATGAACTGGCAAAATAATATTGATAATTTGTTTACACTGGCTCATGAATTTGGGCATTCC
GTCCACAGCTACTATACAAGAAAGCACCAGCCATATCCGTATGGAAACTATAGTATCTTTGTAGCTGAAGTGGCTTCCAC
TACAAATGAAGCGTTACTAGGCGAATACCTGCTTAATCATTTAGACGATAAAAAGCAGCGTTTGTATGTATTAAACCACT
TGTTAGAAGGATTTAGAGGAACGGTATTTAGACAAACGATGTTTGCTGAGTTTGAGCATCTTATTCATGTGAAAGCACAA
GAAGGAGAGGCTTTAACGCCAGAATTTATGACGAACCTTTATTACGACCTGAACAAGAAGTACTTTGGTGACGGCATGGT
GGTTGATAAGGAAATTGGATTAGAGTGGACGAGAATCCCTCATTTTTATTACAACTATTATGTGTATCAATACGCGACAG
GCTATAGTGCGGCGCAGGCATTAAGCAAGCAAATCTTACAAGAAGGAAAACCAGCGGTAGAGCGCTACACCGATTTCCTT
AAAGCAGGAAGCTCTGATTATCCAATCAATGTGCTGAAAAAAGCAGGTGTTGATATGGCTTCTAAAGAACCAATCGAAGC
AGCATGTCAATTGTTCGAAGAAAAACTAAAAGAAATGGAAGAGCTCATCTCCAAAACAGGTGAGTAA

Domains

Predicted by InterproScan.

Oligopeptidase F (Peptidase_M3_N)

(120-189)

Peptidase family M3 (Peptidase_M3)

(211-590)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pepF Streptococcus salivarius strain HSISS4

49.158

97.697

0.48

Multiple sequence alignment