Detailed information    

insolico Bioinformatically predicted

Overview

Name   comA   Type   Regulator
Locus tag   MHH75_RS15175 Genome accession   NZ_CP152025
Coordinates   2900170..2900811 (-) Length   213 a.a.
NCBI ID   WP_034282566.1    Uniprot ID   -
Organism   Bacillus sp. FSL L8-0661     
Function   promoting transcription of comS (predicted from homology)   
Competence regulation

Genomic Context

Location: 2895170..2905811
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MHH75_RS15140 (MHH75_15140) - 2896296..2896727 (+) 432 WP_024423315.1 Na(+)/H(+) antiporter subunit B -
  MHH75_RS15145 (MHH75_15145) - 2896727..2897068 (+) 342 WP_024423316.1 Na(+)/H(+) antiporter subunit C -
  MHH75_RS15150 (MHH75_15150) - 2897061..2898539 (+) 1479 WP_070325967.1 Na+/H+ antiporter subunit D -
  MHH75_RS15155 (MHH75_15155) - 2898546..2899025 (+) 480 WP_024425941.1 Na+/H+ antiporter subunit E -
  MHH75_RS15160 (MHH75_15160) - 2899025..2899306 (+) 282 WP_024425942.1 Na(+)/H(+) antiporter subunit F1 -
  MHH75_RS15165 (MHH75_15165) mnhG 2899290..2899664 (+) 375 WP_024423320.1 monovalent cation/H(+) antiporter subunit G -
  MHH75_RS15170 (MHH75_15170) - 2899757..2900146 (-) 390 WP_024423321.1 hotdog fold thioesterase -
  MHH75_RS15175 (MHH75_15175) comA 2900170..2900811 (-) 642 WP_034282566.1 response regulator transcription factor Regulator
  MHH75_RS15180 (MHH75_15180) comP 2900892..2903204 (-) 2313 WP_120207602.1 ATP-binding protein Regulator
  MHH75_RS15185 (MHH75_15185) comX 2903262..2903429 (-) 168 WP_080696376.1 competence pheromone ComX -
  MHH75_RS15190 (MHH75_15190) - 2903426..2904340 (-) 915 WP_034282569.1 polyprenyl synthetase family protein -
  MHH75_RS15195 (MHH75_15195) degQ 2904492..2904632 (-) 141 WP_003213123.1 degradation enzyme regulation protein DegQ Regulator
  MHH75_RS15200 (MHH75_15200) - 2905138..2905494 (+) 357 WP_034282571.1 hypothetical protein -

Sequence

Protein


Download         Length: 213 a.a.        Molecular weight: 24163.56 Da        Isoelectric Point: 4.6397

>NTDB_id=985526 MHH75_RS15175 WP_034282566.1 2900170..2900811(-) (comA) [Bacillus sp. FSL L8-0661]
MKKILVIDDHPAVMEGTKSILESDQQLSVDCLSPDAEAAFLKTHDFSIYDVILMDLNLGDINGMDIAKQILETNHQVKII
IYTGYEVDDYFEEAIRAGLHGAISKTETKDKIIEYIHRTLQGEVVIQLSYLKKLISQQQEKPEQAQQTDHELLTERECLI
LREVEKGYTNQEIADVLHLSKRSIEYSLTSIFNKLNVGSRTEAVLIAKSESVL

Nucleotide


Download         Length: 642 bp        

>NTDB_id=985526 MHH75_RS15175 WP_034282566.1 2900170..2900811(-) (comA) [Bacillus sp. FSL L8-0661]
ATGAAGAAGATATTGGTCATTGATGATCATCCGGCTGTCATGGAAGGGACAAAAAGCATATTAGAATCAGACCAGCAGCT
ATCAGTCGATTGTTTAAGTCCTGATGCAGAAGCCGCCTTTTTAAAGACGCATGACTTTTCCATCTATGATGTGATTTTAA
TGGATTTAAATCTCGGGGATATCAATGGAATGGACATTGCGAAACAAATTTTAGAAACCAACCATCAAGTGAAAATTATC
ATTTATACAGGGTATGAAGTAGATGATTATTTTGAAGAGGCTATTCGGGCTGGATTACACGGTGCAATTAGCAAAACAGA
GACGAAAGACAAAATTATTGAGTACATACACCGGACATTGCAAGGGGAAGTTGTCATTCAGCTGTCCTATTTAAAGAAAT
TAATTTCACAGCAGCAAGAAAAGCCAGAACAGGCGCAGCAGACTGATCACGAGCTCTTAACCGAACGGGAGTGTTTGATT
CTTAGAGAAGTGGAAAAAGGATACACGAACCAGGAGATTGCCGATGTGCTTCATTTGAGCAAACGGTCAATTGAGTACAG
TTTGACATCCATCTTTAATAAACTGAATGTTGGATCTCGTACAGAAGCGGTGTTAATTGCCAAGTCTGAAAGTGTGCTGT
AA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(4-116)

Bacterial regulatory proteins, luxR family (GerE)

(152-207)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA Bacillus subtilis subsp. subtilis str. 168

71.495

100

0.718

Multiple sequence alignment