Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | MHH75_RS11915 | Genome accession | NZ_CP152025 |
| Coordinates | 2300922..2301257 (+) | Length | 111 a.a. |
| NCBI ID | WP_024422969.1 | Uniprot ID | - |
| Organism | Bacillus sp. FSL L8-0661 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2295922..2306257
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MHH75_RS11895 (MHH75_11895) | gcvT | 2296399..2297496 (-) | 1098 | WP_120208207.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| MHH75_RS11900 (MHH75_11900) | - | 2298058..2299728 (+) | 1671 | WP_034280230.1 | SNF2-related protein | - |
| MHH75_RS11905 (MHH75_11905) | - | 2299743..2300540 (+) | 798 | WP_034280228.1 | YqhG family protein | - |
| MHH75_RS11910 (MHH75_11910) | - | 2300724..2300888 (+) | 165 | WP_075623492.1 | anti-repressor SinI family protein | - |
| MHH75_RS11915 (MHH75_11915) | sinR | 2300922..2301257 (+) | 336 | WP_024422969.1 | transcriptional regulator SinR | Regulator |
| MHH75_RS11920 (MHH75_11920) | - | 2301325..2302125 (-) | 801 | WP_034280222.1 | TasA family protein | - |
| MHH75_RS11925 (MHH75_11925) | - | 2302183..2302755 (-) | 573 | WP_034280218.1 | signal peptidase I | - |
| MHH75_RS11930 (MHH75_11930) | tapA | 2302808..2303335 (-) | 528 | WP_120208209.1 | amyloid fiber anchoring/assembly protein TapA | - |
| MHH75_RS11935 (MHH75_11935) | - | 2303635..2303913 (+) | 279 | WP_061109527.1 | DUF3889 domain-containing protein | - |
| MHH75_RS11940 (MHH75_11940) | - | 2303948..2304142 (-) | 195 | WP_120208337.1 | YqzE family protein | - |
| MHH75_RS11945 (MHH75_11945) | comGG | 2304202..2304585 (-) | 384 | WP_041117969.1 | competence type IV pilus minor pilin ComGG | - |
| MHH75_RS11950 (MHH75_11950) | comGF | 2304582..2305109 (-) | 528 | WP_259407219.1 | competence type IV pilus minor pilin ComGF | - |
| MHH75_RS11955 (MHH75_11955) | comGE | 2305021..2305335 (-) | 315 | WP_041106865.1 | competence type IV pilus minor pilin ComGE | - |
| MHH75_RS11960 (MHH75_11960) | comGD | 2305319..2305765 (-) | 447 | WP_120208211.1 | competence type IV pilus minor pilin ComGD | - |
| MHH75_RS11965 (MHH75_11965) | comGC | 2305758..2306051 (-) | 294 | WP_024422977.1 | competence type IV pilus major pilin ComGC | Machinery gene |
Sequence
Protein
Download Length: 111 a.a. Molecular weight: 12978.56 Da Isoelectric Point: 5.0026
>NTDB_id=985514 MHH75_RS11915 WP_024422969.1 2300922..2301257(+) (sinR) [Bacillus sp. FSL L8-0661]
MIGQRIKQYRNEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLNEKDETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQIWRKKQEEE
MIGQRIKQYRNEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLNEKDETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQIWRKKQEEE
Nucleotide
Download Length: 336 bp
>NTDB_id=985514 MHH75_RS11915 WP_024422969.1 2300922..2301257(+) (sinR) [Bacillus sp. FSL L8-0661]
TTGATTGGCCAGCGTATTAAACAATACCGCAATGAAAAAGGCTACTCACTATCAGAACTGGCCGAAAAGGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAAAGAAACTTGCAAACAAACCCCTCCATTCAATTTCTTGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACACTTTTAAACGAAAAAGATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAAAAA
CTAGTTCGAGATGCAATGACATCAGGGGTTTCGAAAAAGCAATTTCGTGAATTTTTAGATTATCAAATCTGGAGAAAAAA
GCAAGAAGAGGAGTAA
TTGATTGGCCAGCGTATTAAACAATACCGCAATGAAAAAGGCTACTCACTATCAGAACTGGCCGAAAAGGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAAAGAAACTTGCAAACAAACCCCTCCATTCAATTTCTTGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACACTTTTAAACGAAAAAGATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAAAAA
CTAGTTCGAGATGCAATGACATCAGGGGTTTCGAAAAAGCAATTTCGTGAATTTTTAGATTATCAAATCTGGAGAAAAAA
GCAAGAAGAGGAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
94.595 |
100 |
0.946 |