Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   MHH75_RS11720 Genome accession   NZ_CP152025
Coordinates   2266187..2266990 (-) Length   267 a.a.
NCBI ID   WP_024422935.1    Uniprot ID   A0AAX0Z9Q1
Organism   Bacillus sp. FSL L8-0661     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 2261187..2271990
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MHH75_RS11700 (MHH75_11700) - 2263392..2263628 (+) 237 WP_024422931.1 DUF2627 domain-containing protein -
  MHH75_RS11705 (MHH75_11705) - 2263665..2264402 (-) 738 WP_120208197.1 glycerophosphodiester phosphodiesterase -
  MHH75_RS11710 (MHH75_11710) - 2264630..2265730 (-) 1101 WP_024422933.1 Rap family tetratricopeptide repeat protein -
  MHH75_RS11715 (MHH75_11715) - 2265718..2265915 (-) 198 WP_024422934.1 hypothetical protein -
  MHH75_RS11720 (MHH75_11720) spo0A 2266187..2266990 (-) 804 WP_024422935.1 sporulation transcription factor Spo0A Regulator
  MHH75_RS11725 (MHH75_11725) spoIVB 2267276..2268553 (-) 1278 WP_120208199.1 SpoIVB peptidase -
  MHH75_RS11730 (MHH75_11730) recN 2268754..2270487 (-) 1734 WP_034280267.1 DNA repair protein RecN Machinery gene
  MHH75_RS11735 (MHH75_11735) argR 2270521..2270970 (-) 450 WP_024422938.1 transcriptional regulator ArgR -
  MHH75_RS11740 (MHH75_11740) - 2271134..2271988 (-) 855 WP_034280266.1 TlyA family RNA methyltransferase -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29932.46 Da        Isoelectric Point: 6.3918

>NTDB_id=985512 MHH75_RS11720 WP_024422935.1 2266187..2266990(-) (spo0A) [Bacillus sp. FSL L8-0661]
MEKIKVCVADDNRELVGLLTEYIEGQEDMEVLGVAYNGQECLTLFKDKEPDVLLLDIIMPHLDGLAVLERLRENNEMTKQ
PSVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNGTQVTHRSSSIQNSVLRNKPEPKRKNLDASITTI
IHEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTV
SMSKAKPTNSEFIAMVADRLRLEHRAS

Nucleotide


Download         Length: 804 bp        

>NTDB_id=985512 MHH75_RS11720 WP_024422935.1 2266187..2266990(-) (spo0A) [Bacillus sp. FSL L8-0661]
GTGGAGAAAATTAAAGTGTGTGTAGCTGATGACAATCGAGAGCTTGTTGGCCTTTTGACAGAGTACATTGAGGGACAGGA
AGATATGGAAGTACTTGGCGTGGCGTATAATGGTCAGGAATGCCTGACATTATTTAAAGATAAAGAGCCCGACGTTCTCC
TCTTAGACATTATTATGCCTCATTTAGACGGTCTTGCTGTACTAGAACGCCTCCGTGAAAACAATGAAATGACAAAACAG
CCAAGTGTGATTATGCTAACGGCATTTGGACAAGAAGATGTCACGAAAAAAGCAGTTGATTTGGGCGCATCCTATTTCAT
TTTAAAGCCATTTGATATGGAAAACCTAGTAGGTCATATTCGTCAAGTCAGTGGAAACGGCACACAAGTTACCCATCGCT
CTTCATCAATCCAAAACAGTGTTCTTCGTAACAAACCTGAACCGAAACGTAAAAACTTAGATGCGAGCATTACGACCATT
ATTCATGAGATTGGCGTGCCCGCTCATATTAAAGGCTATTTATACTTAAGAGAAGCGATTTCTATGGTGTACAATGACAT
TGAGCTTCTCGGAAGCATTACTAAAGTGTTGTACCCAGACATTGCAAAGAAATTTAACACGACTGCCAGCAGGGTAGAAC
GAGCGATTCGTCATGCCATTGAAGTCGCTTGGAGCAGAGGAAACATTGATTCCATTTCCTCACTCTTTGGTTATACTGTC
AGCATGTCAAAAGCGAAACCAACCAATTCAGAATTTATTGCCATGGTAGCTGATCGTTTGCGATTAGAGCATAGAGCAAG
CTAG

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(6-120)

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(157-260)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

88.06

100

0.884

Multiple sequence alignment