Detailed information NTG0985505

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ACLB5D_RS14150
• Genome accession: NZ_CP184143
• Coordinates: 2843001..2844026 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain F11
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 2838001..2849026

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACLB5D_RS14120	zapB	2838085..2838330 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
ACLB5D_RS14125	rraA	2838415..2838900 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ACLB5D_RS14130	menA	2838993..2839919 (-)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ACLB5D_RS14135	hslU	2839986..2841317 (-)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
ACLB5D_RS14140	hslV	2841327..2841857 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ACLB5D_RS14145	ftsN	2841950..2842909 (-)	960	WP_000068828.1	cell division protein FtsN	-
ACLB5D_RS14150	cytR	2843001..2844026 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
ACLB5D_RS14155	priA	2844182..2846380 (-)	2199	WP_001301269.1	primosomal protein N'	Machinery gene
ACLB5D_RS14160	rpmE	2846583..2846795 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
ACLB5D_RS14165	-	2846850..2847473 (-)	624	WP_000720774.1	TIGR02117 family protein	-
ACLB5D_RS14170	yiiX	2847480..2848088 (-)	609	WP_000797341.1	YiiX family permuted papain-like enzyme	-
ACLB5D_RS14175	metJ	2848272..2848589 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=985505 ACLB5D_RS14150 WP_000644904.1 2843001..2844026(-) (cytR) [Escherichia coli strain F11]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=985505 ACLB5D_RS14150 WP_000644904.1 2843001..2844026(-) (cytR) [Escherichia coli strain F11]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628