Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | MHI23_RS11470 | Genome accession | NZ_CP152024 |
| Coordinates | 2250138..2250473 (+) | Length | 111 a.a. |
| NCBI ID | WP_024422969.1 | Uniprot ID | - |
| Organism | Bacillus sp. FSL M7-0003 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2245138..2255473
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MHI23_RS11450 (MHI23_11450) | gcvT | 2245617..2246714 (-) | 1098 | WP_339239978.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| MHI23_RS11455 (MHI23_11455) | - | 2247275..2248945 (+) | 1671 | WP_024427994.1 | SNF2-related protein | - |
| MHI23_RS11460 (MHI23_11460) | - | 2248960..2249757 (+) | 798 | WP_326161478.1 | YqhG family protein | - |
| MHI23_RS11465 (MHI23_11465) | - | 2249940..2250104 (+) | 165 | WP_073206269.1 | anti-repressor SinI family protein | - |
| MHI23_RS11470 (MHI23_11470) | sinR | 2250138..2250473 (+) | 336 | WP_024422969.1 | transcriptional regulator SinR | Regulator |
| MHI23_RS11475 (MHI23_11475) | - | 2250541..2251341 (-) | 801 | WP_326161477.1 | TasA family protein | - |
| MHI23_RS11480 (MHI23_11480) | - | 2251396..2251968 (-) | 573 | WP_024422971.1 | signal peptidase I | - |
| MHI23_RS11485 (MHI23_11485) | tapA | 2252021..2252548 (-) | 528 | WP_326161475.1 | amyloid fiber anchoring/assembly protein TapA | - |
| MHI23_RS11490 (MHI23_11490) | - | 2252848..2253126 (+) | 279 | WP_171464609.1 | DUF3889 domain-containing protein | - |
| MHI23_RS11495 (MHI23_11495) | - | 2253161..2253355 (-) | 195 | WP_056767455.1 | YqzE family protein | - |
| MHI23_RS11500 (MHI23_11500) | comGG | 2253415..2253798 (-) | 384 | WP_125586574.1 | competence type IV pilus minor pilin ComGG | - |
| MHI23_RS11505 (MHI23_11505) | comGF | 2253795..2254322 (-) | 528 | WP_335374388.1 | competence type IV pilus minor pilin ComGF | - |
| MHI23_RS11510 (MHI23_11510) | comGE | 2254234..2254548 (-) | 315 | WP_025092974.1 | competence type IV pilus minor pilin ComGE | - |
| MHI23_RS11515 (MHI23_11515) | comGD | 2254532..2254978 (-) | 447 | WP_125586578.1 | competence type IV pilus minor pilin ComGD | - |
| MHI23_RS11520 (MHI23_11520) | comGC | 2254971..2255264 (-) | 294 | WP_024422977.1 | competence type IV pilus major pilin ComGC | Machinery gene |
Sequence
Protein
Download Length: 111 a.a. Molecular weight: 12978.56 Da Isoelectric Point: 5.0026
>NTDB_id=985453 MHI23_RS11470 WP_024422969.1 2250138..2250473(+) (sinR) [Bacillus sp. FSL M7-0003]
MIGQRIKQYRNEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLNEKDETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQIWRKKQEEE
MIGQRIKQYRNEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLNEKDETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQIWRKKQEEE
Nucleotide
Download Length: 336 bp
>NTDB_id=985453 MHI23_RS11470 WP_024422969.1 2250138..2250473(+) (sinR) [Bacillus sp. FSL M7-0003]
TTGATTGGCCAGCGTATTAAACAATACCGCAATGAAAAAGGCTACTCACTATCAGAACTGGCCGAAAAGGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAAAGAAACTTGCAAACAAACCCCTCCATTCAATTTCTTGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACACTTTTAAACGAAAAAGATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAAAAA
CTAGTTCGAGATGCAATGACATCAGGGGTTTCGAAAAAGCAATTTCGTGAATTTTTAGATTATCAAATCTGGAGAAAAAA
GCAAGAAGAGGAGTAA
TTGATTGGCCAGCGTATTAAACAATACCGCAATGAAAAAGGCTACTCACTATCAGAACTGGCCGAAAAGGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAAAGAAACTTGCAAACAAACCCCTCCATTCAATTTCTTGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACACTTTTAAACGAAAAAGATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAAAAA
CTAGTTCGAGATGCAATGACATCAGGGGTTTCGAAAAAGCAATTTCGTGAATTTTTAGATTATCAAATCTGGAGAAAAAA
GCAAGAAGAGGAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
94.595 |
100 |
0.946 |