Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   MHI23_RS11275 Genome accession   NZ_CP152024
Coordinates   2215407..2216210 (-) Length   267 a.a.
NCBI ID   WP_024422935.1    Uniprot ID   A0AAX0Z9Q1
Organism   Bacillus sp. FSL M7-0003     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 2210407..2221210
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MHI23_RS11255 (MHI23_11255) - 2212611..2212847 (+) 237 WP_024422931.1 DUF2627 domain-containing protein -
  MHI23_RS11260 (MHI23_11260) - 2212884..2213621 (-) 738 WP_024422932.1 glycerophosphodiester phosphodiesterase -
  MHI23_RS11265 (MHI23_11265) - 2213850..2214950 (-) 1101 WP_034622321.1 Rap family tetratricopeptide repeat protein -
  MHI23_RS11270 (MHI23_11270) - 2214938..2215135 (-) 198 WP_024422934.1 hypothetical protein -
  MHI23_RS11275 (MHI23_11275) spo0A 2215407..2216210 (-) 804 WP_024422935.1 sporulation transcription factor Spo0A Regulator
  MHI23_RS11280 (MHI23_11280) spoIVB 2216495..2217772 (-) 1278 WP_025092993.1 SpoIVB peptidase -
  MHI23_RS11285 (MHI23_11285) recN 2217973..2219706 (-) 1734 WP_024428012.1 DNA repair protein RecN Machinery gene
  MHI23_RS11290 (MHI23_11290) argR 2219740..2220189 (-) 450 WP_024422938.1 transcriptional regulator ArgR -
  MHI23_RS11295 (MHI23_11295) - 2220349..2221203 (-) 855 WP_024428011.1 TlyA family RNA methyltransferase -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29932.46 Da        Isoelectric Point: 6.3918

>NTDB_id=985451 MHI23_RS11275 WP_024422935.1 2215407..2216210(-) (spo0A) [Bacillus sp. FSL M7-0003]
MEKIKVCVADDNRELVGLLTEYIEGQEDMEVLGVAYNGQECLTLFKDKEPDVLLLDIIMPHLDGLAVLERLRENNEMTKQ
PSVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNGTQVTHRSSSIQNSVLRNKPEPKRKNLDASITTI
IHEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTV
SMSKAKPTNSEFIAMVADRLRLEHRAS

Nucleotide


Download         Length: 804 bp        

>NTDB_id=985451 MHI23_RS11275 WP_024422935.1 2215407..2216210(-) (spo0A) [Bacillus sp. FSL M7-0003]
GTGGAGAAAATTAAAGTGTGTGTAGCTGATGACAATCGAGAGCTTGTTGGCCTTTTGACAGAGTATATTGAGGGACAGGA
AGATATGGAAGTACTTGGCGTGGCGTATAATGGTCAGGAATGCCTGACATTATTTAAAGATAAAGAGCCCGACGTTCTCC
TCTTAGACATTATCATGCCTCATTTAGACGGTCTTGCTGTACTAGAACGCCTCCGTGAAAACAATGAAATGACAAAACAG
CCAAGTGTGATTATGCTAACGGCATTTGGACAAGAAGATGTCACGAAAAAAGCAGTTGATTTAGGCGCATCCTATTTCAT
TTTAAAGCCATTTGATATGGAAAACCTAGTAGGTCATATTCGTCAAGTCAGTGGAAACGGCACACAAGTTACCCATCGCT
CTTCATCAATCCAAAACAGTGTTCTTCGTAACAAACCTGAACCGAAACGTAAAAACTTAGATGCGAGCATTACGACCATT
ATTCATGAAATTGGCGTGCCCGCTCATATTAAAGGCTATTTATACTTAAGAGAAGCCATTTCTATGGTGTACAATGACAT
TGAGCTTCTCGGAAGCATCACTAAAGTGTTGTACCCAGACATTGCAAAGAAATTTAACACGACTGCCAGCAGGGTAGAAC
GAGCGATTCGTCATGCCATTGAAGTCGCTTGGAGCAGAGGAAACATTGATTCCATTTCCTCACTCTTTGGTTATACTGTC
AGCATGTCAAAAGCGAAACCAACCAATTCAGAATTTATTGCCATGGTAGCTGATCGTTTGCGATTAGAGCATAGAGCAAG
CTAG

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(6-120)

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(157-260)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

88.06

100

0.884

Multiple sequence alignment