Detailed information    

insolico Bioinformatically predicted

Overview

Name   nucA/comI   Type   Machinery gene
Locus tag   MHI23_RS08775 Genome accession   NZ_CP152024
Coordinates   1739331..1739711 (+) Length   126 a.a.
NCBI ID   WP_044335941.1    Uniprot ID   A0AAP7UKB4
Organism   Bacillus sp. FSL M7-0003     
Function   cleavage of dsDNA into ssDNA (predicted from homology)   
DNA processing

Genomic Context

Location: 1734331..1744711
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MHI23_RS08765 (MHI23_08765) - 1734824..1737967 (+) 3144 WP_342492444.1 cytochrome P450 -
  MHI23_RS08770 (MHI23_08770) - 1738165..1739073 (+) 909 WP_024425124.1 trypsin-like serine protease -
  MHI23_RS08775 (MHI23_08775) nucA/comI 1739331..1739711 (+) 381 WP_044335941.1 NucA/NucB deoxyribonuclease domain-containing protein Machinery gene
  MHI23_RS08780 (MHI23_08780) - 1739856..1740704 (+) 849 WP_041109222.1 STAS domain-containing protein -
  MHI23_RS08785 (MHI23_08785) - 1740815..1741965 (+) 1151 WP_125587610.1 IS3 family transposase -
  MHI23_RS08790 (MHI23_08790) - 1742025..1742567 (-) 543 WP_024425127.1 IseA DL-endopeptidase inhibitor family protein -
  MHI23_RS08795 (MHI23_08795) - 1742864..1743310 (+) 447 WP_342492445.1 hypothetical protein -
  MHI23_RS08800 (MHI23_08800) lexA 1743355..1743975 (-) 621 WP_024425129.1 transcriptional repressor LexA -
  MHI23_RS08805 (MHI23_08805) yneA 1744134..1744445 (+) 312 WP_041117521.1 cell division suppressor protein YneA -

Sequence

Protein


Download         Length: 126 a.a.        Molecular weight: 13727.41 Da        Isoelectric Point: 8.5068

>NTDB_id=985449 MHI23_RS08775 WP_044335941.1 1739331..1739711(+) (nucA/comI) [Bacillus sp. FSL M7-0003]
MGTLLGGFGEKQAAKGADRYDHVVQFPKERYPETGSHIQEAIRKGHSDVCTIDRNGADARRQESLKGIPTKPGFDRDEWP
MAVCLEGGKGASVQYVSPSDNRGAGSWVGHQISGFPDGKRILFIVK

Nucleotide


Download         Length: 381 bp        

>NTDB_id=985449 MHI23_RS08775 WP_044335941.1 1739331..1739711(+) (nucA/comI) [Bacillus sp. FSL M7-0003]
ATGGGCACGTTGTTAGGTGGATTTGGAGAGAAGCAGGCAGCAAAAGGGGCTGATCGATATGATCATGTCGTTCAATTTCC
AAAGGAAAGGTACCCTGAAACAGGCAGTCATATTCAAGAAGCCATCCGAAAAGGGCATTCAGATGTGTGTACCATTGACC
GAAATGGAGCAGATGCCCGCAGGCAAGAATCATTAAAAGGAATTCCGACAAAACCTGGCTTTGACCGGGATGAATGGCCA
ATGGCGGTTTGTCTTGAGGGAGGAAAAGGCGCAAGCGTACAATATGTCAGTCCATCCGATAATAGGGGAGCAGGCTCATG
GGTCGGGCACCAAATCAGCGGGTTTCCTGATGGGAAAAGAATATTATTCATTGTGAAATAA

Domains

Predicted by InterproScan.

Deoxyribonuclease NucA/NucB (DNase_NucA_NucB)

(29-116)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nucA/comI Bacillus subtilis subsp. subtilis str. 168

57.983

94.444

0.548

Multiple sequence alignment