Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   MHI23_RS05190 Genome accession   NZ_CP152024
Coordinates   1038054..1039004 (+) Length   316 a.a.
NCBI ID   WP_149125796.1    Uniprot ID   -
Organism   Bacillus sp. FSL M7-0003     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1033054..1044004
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MHI23_RS05165 (MHI23_05165) - 1034543..1035403 (+) 861 WP_024425480.1 SDR family oxidoreductase -
  MHI23_RS05170 (MHI23_05170) - 1035460..1035696 (-) 237 WP_008348804.1 IDEAL domain-containing protein -
  MHI23_RS05175 (MHI23_05175) comK 1035986..1036564 (+) 579 WP_034621820.1 competence protein ComK Regulator
  MHI23_RS05180 (MHI23_05180) - 1036864..1037346 (+) 483 WP_024426543.1 hypothetical protein -
  MHI23_RS05185 (MHI23_05185) - 1037613..1037891 (+) 279 WP_024425485.1 barstar family protein -
  MHI23_RS05190 (MHI23_05190) ceuB 1038054..1039004 (+) 951 WP_149125796.1 ABC transporter permease Machinery gene
  MHI23_RS05195 (MHI23_05195) - 1038997..1039947 (+) 951 WP_024425487.1 iron chelate uptake ABC transporter family permease subunit -
  MHI23_RS05200 (MHI23_05200) - 1039938..1040696 (+) 759 WP_024425488.1 ATP-binding cassette domain-containing protein -
  MHI23_RS05205 (MHI23_05205) - 1040718..1041662 (+) 945 WP_149125795.1 siderophore ABC transporter substrate-binding protein -
  MHI23_RS05210 (MHI23_05210) - 1041801..1042754 (+) 954 WP_149125794.1 LCP family protein -
  MHI23_RS05215 (MHI23_05215) - 1042826..1043188 (-) 363 WP_034282166.1 hypothetical protein -
  MHI23_RS05220 (MHI23_05220) - 1043345..1043962 (+) 618 WP_024425492.1 TVP38/TMEM64 family protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34957.31 Da        Isoelectric Point: 9.7475

>NTDB_id=985431 MHI23_RS05190 WP_149125796.1 1038054..1039004(+) (ceuB) [Bacillus sp. FSL M7-0003]
MKLYQLSLFFVCLACISLFVGVQDLSILQLFHLTDEQVHTLVSSRLPRLVSIVLAGMSLSLCGFIMQSMTRNKFVSPTTA
GTMDWAKLGILVAMLVFTQANPLMKMGIAFLFTLAGNLLFLKILRHIKVNDTIYVPLVGLMFGGIVSSISTFIAYKYDLI
QNVSAWLQGDFSLIVQGRYELLYVSVPLLIIAYLYADRFTVAGMGESFAVNLGLTYKRVMAVGLVIVSMITSVTILTVGM
LPFLGLIIPNIVSIYRGDHLKKSLPHTALLGAIFVLICDVLGRVIIYPYEISVGLMVGIIGSAIFLYMLLRRKRYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=985431 MHI23_RS05190 WP_149125796.1 1038054..1039004(+) (ceuB) [Bacillus sp. FSL M7-0003]
ATGAAATTGTATCAATTAAGTTTGTTTTTTGTATGTTTGGCATGTATATCTCTGTTTGTCGGTGTACAGGATCTGTCCAT
TTTACAGCTGTTTCATTTAACAGATGAACAAGTGCACACGTTAGTTTCAAGCCGTCTCCCGCGTCTCGTGAGTATTGTGC
TTGCTGGTATGAGCCTTAGTTTATGCGGCTTTATTATGCAAAGCATGACGAGGAATAAATTTGTTTCACCAACCACTGCA
GGAACGATGGATTGGGCGAAGCTTGGTATTTTAGTAGCAATGCTTGTTTTTACACAAGCGAATCCGCTTATGAAAATGGG
GATTGCGTTTCTATTTACTTTAGCTGGGAATCTTCTTTTCTTAAAAATCCTGCGGCATATTAAGGTGAACGATACGATTT
ATGTACCATTAGTCGGCTTAATGTTTGGGGGGATTGTCAGTTCAATATCTACGTTTATAGCCTATAAATATGATTTGATC
CAAAACGTATCCGCATGGCTTCAAGGAGATTTTTCTCTTATTGTCCAAGGGCGTTATGAACTGCTCTATGTGAGCGTTCC
ACTATTGATCATTGCGTATTTATATGCTGACCGCTTTACAGTGGCAGGCATGGGCGAGAGCTTTGCCGTTAACTTAGGTT
TAACGTATAAACGTGTGATGGCGGTTGGGTTGGTGATCGTTTCAATGATTACGTCTGTCACCATTTTAACTGTCGGAATG
CTGCCATTCCTTGGATTAATCATTCCGAATATTGTATCGATCTACCGCGGCGATCACTTGAAAAAAAGCCTCCCGCATAC
AGCTTTACTAGGAGCTATTTTTGTTCTGATTTGTGATGTGCTCGGAAGGGTGATCATTTATCCATATGAAATATCAGTTG
GACTCATGGTAGGCATCATCGGAAGTGCGATCTTCCTGTACATGTTATTAAGGAGGAAACGCTATGCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(11-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

50.955

99.367

0.506

Multiple sequence alignment