Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   MHI23_RS04160 Genome accession   NZ_CP152024
Coordinates   844063..844854 (+) Length   263 a.a.
NCBI ID   WP_133744899.1    Uniprot ID   -
Organism   Bacillus sp. FSL M7-0003     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 839063..849854
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MHI23_RS04125 (MHI23_04125) - 839151..839699 (+) 549 WP_056767792.1 thioredoxin family protein -
  MHI23_RS04130 (MHI23_04130) - 840034..840501 (+) 468 WP_024425226.1 DUF393 domain-containing protein -
  MHI23_RS04135 (MHI23_04135) - 840538..841794 (-) 1257 WP_024425225.1 transcriptional regulator -
  MHI23_RS04140 (MHI23_04140) - 842066..842653 (+) 588 WP_024425811.1 nitroreductase -
  MHI23_RS04145 (MHI23_04145) - 842692..842847 (-) 156 WP_024425223.1 YfhD family protein -
  MHI23_RS04150 (MHI23_04150) - 842909..843019 (-) 111 WP_017358836.1 YfhE family protein -
  MHI23_RS04155 (MHI23_04155) - 843072..843968 (-) 897 WP_056767794.1 TIGR01777 family oxidoreductase -
  MHI23_RS04160 (MHI23_04160) recX 844063..844854 (+) 792 WP_133744899.1 recombination regulator RecX Regulator
  MHI23_RS04165 (MHI23_04165) - 844858..845172 (+) 315 WP_041087336.1 YfhH family protein -
  MHI23_RS04170 (MHI23_04170) - 845196..845369 (-) 174 WP_008360604.1 YpzG family protein -
  MHI23_RS04175 (MHI23_04175) - 845395..845544 (-) 150 WP_003217849.1 small, acid-soluble spore protein K -
  MHI23_RS04180 (MHI23_04180) - 845661..845933 (+) 273 WP_024425219.1 YfhJ family protein -
  MHI23_RS04185 (MHI23_04185) - 846233..847216 (+) 984 WP_024425218.1 glycosyltransferase family 2 protein -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30621.06 Da        Isoelectric Point: 6.6679

>NTDB_id=985426 MHI23_RS04160 WP_133744899.1 844063..844854(+) (recX) [Bacillus sp. FSL M7-0003]
MPYITKISAQKNNTERVNIFLDEKYAFSVDLDVLVQHDLKKGKELDEADIIEIQFGDSVKKGFQQAVDYLSYRMRSVKEV
TDYLTKKEIPAPAISEIIHKLKHYKYVNDLEFAEAYVSTHRKTNSKGPSVLKKELKLKGIDDDTIEQALSQYPDDLQLEE
AVKQVLKLVKKEKNRSAKEIEQRIKLQLQRKGFSFEIIDKALQEAYDGQEDEKEEEALLYMLEKAKRKVGYDGSFEKKMK
VKQFLFRKGFDLDTIDHVLDKGE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=985426 MHI23_RS04160 WP_133744899.1 844063..844854(+) (recX) [Bacillus sp. FSL M7-0003]
ATGCCCTATATTACAAAAATTTCTGCTCAGAAAAACAATACCGAGCGGGTCAACATCTTTCTTGATGAAAAGTACGCCTT
TAGCGTTGATTTAGATGTGCTCGTCCAGCACGATTTGAAAAAAGGAAAAGAGCTGGACGAAGCAGATATCATTGAGATTC
AATTCGGTGATTCAGTGAAAAAAGGATTTCAGCAGGCCGTTGATTATTTATCCTACCGCATGAGATCAGTGAAAGAAGTC
ACCGATTATTTAACGAAAAAAGAAATCCCTGCACCTGCTATTAGTGAAATTATACACAAATTGAAGCATTATAAGTATGT
AAATGATCTTGAATTTGCAGAAGCCTATGTCAGCACCCACCGGAAAACGAACAGCAAAGGACCGTCCGTCCTAAAAAAAG
AATTGAAGCTCAAGGGGATAGACGATGACACGATTGAACAGGCGCTATCGCAATACCCTGATGACTTACAGCTGGAGGAA
GCTGTAAAGCAGGTTCTCAAGCTTGTCAAAAAAGAAAAAAATCGTTCTGCAAAAGAGATCGAGCAGCGCATCAAGCTGCA
GCTGCAGCGAAAGGGATTTTCGTTTGAGATCATTGATAAAGCCCTTCAAGAAGCCTATGATGGACAAGAAGACGAAAAGG
AAGAAGAAGCCCTCCTTTATATGCTGGAGAAGGCAAAACGCAAGGTAGGATATGACGGATCATTTGAAAAGAAGATGAAA
GTAAAGCAATTTTTATTCAGAAAAGGCTTTGATCTTGATACAATTGATCACGTTTTAGACAAAGGGGAATGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

64.773

100

0.65

Multiple sequence alignment