Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   MHI41_RS06795 Genome accession   NZ_CP152023
Coordinates   1339106..1339567 (-) Length   153 a.a.
NCBI ID   WP_008356877.1    Uniprot ID   -
Organism   Bacillus sp. FSL M7-0307     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1334106..1344567
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MHI41_RS06770 (MHI41_06770) - 1334711..1335595 (+) 885 WP_342494660.1 cation diffusion facilitator family transporter -
  MHI41_RS06775 (MHI41_06775) - 1335661..1335813 (-) 153 WP_017367142.1 hypothetical protein -
  MHI41_RS06780 (MHI41_06780) - 1336114..1336653 (+) 540 WP_007498690.1 RDD family protein -
  MHI41_RS06785 (MHI41_06785) - 1336779..1338089 (+) 1311 WP_342494661.1 MFS transporter -
  MHI41_RS06790 (MHI41_06790) - 1338163..1339071 (+) 909 WP_008348035.1 chemotaxis protein -
  MHI41_RS06795 (MHI41_06795) kre 1339106..1339567 (-) 462 WP_008356877.1 YkyB family protein Regulator
  MHI41_RS06800 (MHI41_06800) - 1339787..1340683 (-) 897 WP_125588961.1 helix-turn-helix domain-containing protein -
  MHI41_RS06805 (MHI41_06805) - 1340797..1341729 (+) 933 WP_342494662.1 EamA family transporter -
  MHI41_RS06810 (MHI41_06810) - 1341899..1342114 (-) 216 WP_008348016.1 hypothetical protein -
  MHI41_RS06815 (MHI41_06815) - 1342282..1342458 (+) 177 WP_008348014.1 hypothetical protein -
  MHI41_RS06820 (MHI41_06820) - 1342686..1343963 (-) 1278 WP_008348012.1 MFS transporter -
  MHI41_RS06825 (MHI41_06825) - 1344037..1344534 (-) 498 WP_178930098.1 L,D-transpeptidase family protein -

Sequence

Protein


Download         Length: 153 a.a.        Molecular weight: 17711.30 Da        Isoelectric Point: 10.2452

>NTDB_id=985382 MHI41_RS06795 WP_008356877.1 1339106..1339567(-) (kre) [Bacillus sp. FSL M7-0307]
MDDYAHTKDIEPTAENIAKAIYTVNRHAKTAPNPKFLYLLKKRALQKLLQEGKGRKVGLHFSNNPKYSQQQSDVLIEIGD
YYFHLPPTKEDFEFLPHLGNLNQSYRNPKANMSLNRAKQILQTYVGLKEKPAATKQKSHYTKPVFKRLGESYF

Nucleotide


Download         Length: 462 bp        

>NTDB_id=985382 MHI41_RS06795 WP_008356877.1 1339106..1339567(-) (kre) [Bacillus sp. FSL M7-0307]
ATGGACGATTATGCTCATACTAAAGACATAGAACCTACAGCAGAAAACATCGCAAAAGCCATTTATACTGTTAACCGCCA
TGCTAAAACCGCACCAAATCCCAAGTTTCTTTATCTTTTGAAAAAACGTGCGCTGCAAAAACTATTGCAAGAAGGTAAAG
GAAGAAAAGTGGGCCTACATTTCTCTAACAATCCCAAATATAGTCAACAACAGTCCGACGTGCTGATTGAAATTGGAGAT
TATTATTTTCATCTGCCACCAACTAAAGAAGACTTCGAATTTTTGCCACACTTAGGAAATTTAAATCAATCATATCGCAA
TCCAAAAGCGAATATGTCATTAAATCGAGCGAAACAAATACTTCAAACGTATGTCGGTTTAAAAGAAAAACCTGCCGCCA
CAAAACAAAAATCACATTATACAAAACCCGTCTTCAAACGGCTCGGGGAAAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

75.974

100

0.765

Multiple sequence alignment