Detailed information    

insolico Bioinformatically predicted

Overview

Name   pepF   Type   Regulator
Locus tag   MHI41_RS05725 Genome accession   NZ_CP152023
Coordinates   1144260..1146086 (+) Length   608 a.a.
NCBI ID   WP_282706805.1    Uniprot ID   -
Organism   Bacillus sp. FSL M7-0307     
Function   degradation of XIP; competence shut-off (predicted from homology)   
Competence regulation

Genomic Context

Location: 1139260..1151086
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MHI41_RS05705 (MHI41_05705) - 1139521..1140186 (-) 666 WP_007499010.1 TerC family protein -
  MHI41_RS05710 (MHI41_05710) mecA 1140451..1141116 (+) 666 WP_008348474.1 adaptor protein MecA Regulator
  MHI41_RS05715 (MHI41_05715) cls 1141202..1142722 (+) 1521 WP_008348473.1 cardiolipin synthase -
  MHI41_RS05720 (MHI41_05720) - 1142885..1144045 (+) 1161 WP_272511399.1 competence protein CoiA family protein -
  MHI41_RS05725 (MHI41_05725) pepF 1144260..1146086 (+) 1827 WP_282706805.1 oligoendopeptidase F Regulator
  MHI41_RS05730 (MHI41_05730) - 1146374..1146547 (-) 174 WP_008348466.1 hypothetical protein -
  MHI41_RS05735 (MHI41_05735) - 1146843..1147754 (-) 912 WP_007499002.1 ClpXP adapter SpxH family protein -
  MHI41_RS05740 (MHI41_05740) - 1147751..1148149 (-) 399 WP_007499001.1 thiol management oxidoreductase -
  MHI41_RS05745 (MHI41_05745) - 1148427..1149191 (-) 765 WP_008348461.1 lytic transglycosylase domain-containing protein -
  MHI41_RS05750 (MHI41_05750) - 1149217..1149792 (-) 576 WP_048001687.1 CYTH domain-containing protein -
  MHI41_RS05755 (MHI41_05755) - 1150010..1150375 (+) 366 WP_008348459.1 hypothetical protein -
  MHI41_RS05760 (MHI41_05760) - 1150409..1151038 (+) 630 WP_008348457.1 GTP pyrophosphokinase family protein -

Sequence

Protein


Download         Length: 608 a.a.        Molecular weight: 70283.94 Da        Isoelectric Point: 5.2858

>NTDB_id=985378 MHI41_RS05725 WP_282706805.1 1144260..1146086(+) (pepF) [Bacillus sp. FSL M7-0307]
MTSQNNNNHLPDRSEVKEENKWRLEDIFESVDSWNKEFEAVKKEIPKLAQFKGKLAHSADVLYEALTFQDQLSEKLGKLY
TYAHMKYDEDTTNSSFQALNDKASNLFTQLSSTSAYIVPEILSIQEDKLQQFILEKEELKLYSHALEEINKERPHILSEE
QEALLAEASEPLSTSSTTFSMFNNADISFPSVKDENGEEKKITHGNFITFLNSDDREVRKNAFKAVYKTYDQYKNTLAST
LSGSIKKDNFYAKVRHYKSAREAALSRNSIPEEVYDNLIDTVHQYLPLLHRYIELRKKVLKLDEVHNYDLYTPLVKDAGM
KLTYDEAKDYMLKGLAPLGEEYVSVLKEGLENRWVDVYENKGKRSGAYSSGSYGTNPYILMNWQNNIDNLFTLAHEFGHS
VHSYYTRKHQPYPYGNYSIFVAEVASTTNEALLGEYLLNHLEDKKQRLYVLNHLLEGFRGTVFRQTMFAEFEHLIHVKAQ
EGEALTPEFMTNLYYDLNKKYFGDGMVVDKEIGLEWTRIPHFYYNYYVYQYATGYSAAQALSKQILEEGKPAVERYTDFL
KAGSSDYPINVLKKAGVDMASKEPIEAACQLFEEKLKEMEELISKTGE

Nucleotide


Download         Length: 1827 bp        

>NTDB_id=985378 MHI41_RS05725 WP_282706805.1 1144260..1146086(+) (pepF) [Bacillus sp. FSL M7-0307]
ATGACTTCACAAAATAACAACAATCATTTACCAGACAGAAGCGAAGTAAAAGAAGAAAACAAATGGCGCCTTGAAGATAT
TTTTGAAAGTGTCGATTCTTGGAATAAGGAATTCGAAGCTGTAAAAAAAGAAATTCCGAAGCTCGCCCAATTTAAAGGCA
AGCTGGCCCATTCTGCTGATGTCTTGTATGAAGCCCTAACATTTCAGGATCAACTTTCTGAAAAGCTTGGCAAGCTTTAT
ACATATGCGCACATGAAATACGATGAAGATACAACAAATTCATCATTTCAGGCTTTAAATGATAAAGCATCCAATTTATT
TACACAGCTGTCTAGTACATCTGCCTATATTGTTCCGGAAATTTTATCTATTCAAGAAGATAAGCTGCAACAATTTATTT
TGGAAAAAGAAGAATTAAAACTTTATTCTCACGCTCTCGAAGAAATTAACAAAGAGCGTCCGCATATTTTAAGTGAGGAG
CAAGAAGCTTTATTAGCTGAAGCCTCTGAACCTTTATCAACATCATCCACTACGTTTAGTATGTTTAATAATGCAGATAT
TTCGTTCCCTTCTGTTAAGGATGAAAATGGAGAAGAAAAGAAAATTACTCATGGCAACTTCATTACCTTTTTAAACAGTG
ATGATCGTGAAGTGAGAAAGAATGCTTTTAAAGCCGTTTATAAAACGTATGATCAGTATAAGAATACTTTGGCGTCTACA
CTCAGCGGCTCGATTAAAAAGGATAATTTTTATGCGAAAGTACGTCATTACAAATCGGCAAGAGAAGCAGCGTTATCACG
AAATAGTATTCCTGAAGAAGTGTATGACAATCTAATTGATACAGTTCATCAATATTTACCGTTATTACATCGCTACATTG
AATTGCGTAAAAAGGTATTAAAGCTTGATGAAGTGCACAATTATGACTTGTATACACCATTAGTAAAAGATGCTGGCATG
AAGCTGACCTATGATGAAGCAAAGGATTATATGCTGAAAGGGTTAGCGCCATTAGGAGAAGAATATGTTTCGGTATTAAA
AGAGGGACTCGAAAATCGCTGGGTAGACGTTTATGAGAATAAAGGGAAACGAAGCGGCGCGTATTCTTCTGGAAGCTATG
GCACGAACCCTTATATCTTAATGAACTGGCAAAATAATATTGATAATTTATTTACGCTGGCTCATGAATTTGGTCACTCT
GTTCATAGCTACTATACAAGAAAGCATCAGCCATATCCGTACGGAAACTACAGCATTTTTGTAGCAGAAGTGGCTTCTAC
AACAAATGAAGCATTACTAGGTGAATACTTACTCAATCATTTAGAGGACAAAAAGCAGCGCTTGTATGTGCTCAATCACT
TGTTAGAAGGATTTAGAGGGACGGTATTCAGACAAACGATGTTTGCAGAGTTCGAGCATCTCATTCATGTGAAAGCGCAA
GAAGGGGAGGCATTAACGCCAGAGTTTATGACGAACCTGTATTACGACCTGAATAAGAAGTATTTTGGCGACGGTATGGT
TGTGGATAAGGAAATCGGATTAGAATGGACGCGAATTCCGCATTTCTATTACAACTATTATGTGTATCAATATGCAACAG
GCTATAGTGCGGCTCAGGCATTAAGTAAACAAATTTTAGAAGAAGGGAAACCTGCGGTGGAGCGCTATACAGATTTCCTT
AAAGCAGGAAGCTCTGACTATCCAATCAACGTGCTGAAAAAAGCTGGTGTAGATATGGCATCAAAAGAACCAATTGAGGC
AGCATGTCAATTGTTTGAAGAAAAATTAAAGGAAATGGAAGAGCTCATCTCAAAGACTGGTGAGTAA

Domains

Predicted by InterproScan.

Peptidase family M3 (Peptidase_M3)

(211-590)

Oligopeptidase F (Peptidase_M3_N)

(120-189)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pepF Streptococcus salivarius strain HSISS4

49.158

97.697

0.48

Multiple sequence alignment