Detailed information    

insolico Bioinformatically predicted

Overview

Name   nucA/comI   Type   Machinery gene
Locus tag   MHI41_RS01950 Genome accession   NZ_CP152023
Coordinates   365889..366317 (-) Length   142 a.a.
NCBI ID   WP_007498233.1    Uniprot ID   A0AAU7FLT6
Organism   Bacillus sp. FSL M7-0307     
Function   cleavage of dsDNA into ssDNA (predicted from homology)   
DNA processing

Genomic Context

Location: 360889..371317
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MHI41_RS01920 (MHI41_01920) - 361031..361360 (+) 330 WP_342494479.1 YckD family protein -
  MHI41_RS01925 (MHI41_01925) - 361407..362171 (-) 765 WP_342494480.1 MBL fold metallo-hydrolase -
  MHI41_RS01930 (MHI41_01930) - 362288..362707 (+) 420 WP_026050043.1 Lrp/AsnC family transcriptional regulator -
  MHI41_RS01935 (MHI41_01935) - 362732..363538 (+) 807 WP_342494481.1 AAC(3) family N-acetyltransferase -
  MHI41_RS01940 (MHI41_01940) comJ 363540..363926 (-) 387 WP_342494482.1 competence protein ComJ -
  MHI41_RS01945 (MHI41_01945) - 364064..365761 (-) 1698 WP_342494483.1 methyl-accepting chemotaxis protein -
  MHI41_RS01950 (MHI41_01950) nucA/comI 365889..366317 (-) 429 WP_007498233.1 NucA/NucB deoxyribonuclease domain-containing protein Machinery gene
  MHI41_RS01955 (MHI41_01955) - 366684..368753 (+) 2070 WP_342494484.1 hydantoinase/oxoprolinase family protein -
  MHI41_RS01960 (MHI41_01960) - 368743..370728 (+) 1986 WP_342494485.1 hydantoinase B/oxoprolinase family protein -

Sequence

Protein


Download         Length: 142 a.a.        Molecular weight: 15926.90 Da        Isoelectric Point: 6.4881

>NTDB_id=985364 MHI41_RS01950 WP_007498233.1 365889..366317(-) (nucA/comI) [Bacillus sp. FSL M7-0307]
MKLLKTILLLLLIVIGIATGYVQLGQHKQETTNSSYDKTIHFPSDRYPETAKHIEEAIDEGHSSICTIDRKNSDEQRDKS
LHGIPTKRGYDRDEWPMAMCKEGGAGASVKYVRPSDNRGAGSWVSHQLSDDPDGTRIQFIIE

Nucleotide


Download         Length: 429 bp        

>NTDB_id=985364 MHI41_RS01950 WP_007498233.1 365889..366317(-) (nucA/comI) [Bacillus sp. FSL M7-0307]
ATGAAACTTCTTAAAACCATTCTCTTGCTTTTATTGATTGTCATTGGTATAGCGACAGGCTATGTCCAACTAGGGCAACA
TAAACAAGAGACGACAAACTCTTCTTATGACAAAACCATTCACTTTCCATCAGATCGATATCCAGAAACCGCGAAGCACA
TAGAAGAAGCTATTGACGAAGGTCATTCTTCCATTTGCACCATTGATCGAAAAAATAGTGATGAGCAAAGAGACAAATCA
CTTCATGGCATTCCAACAAAGCGTGGTTATGATCGTGATGAATGGCCAATGGCGATGTGTAAAGAAGGTGGAGCAGGGGC
TTCTGTCAAATATGTACGTCCTTCGGATAATAGGGGGGCAGGCTCTTGGGTAAGTCATCAATTATCAGATGATCCTGATG
GCACAAGAATCCAATTTATTATCGAGTAG

Domains

Predicted by InterproScan.

Deoxyribonuclease NucA/NucB (DNase_NucA_NucB)

(46-136)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nucA/comI Bacillus subtilis subsp. subtilis str. 168

68.224

75.352

0.514

Multiple sequence alignment