Detailed information    

insolico Bioinformatically predicted

Overview

Name   nucA/comI   Type   Machinery gene
Locus tag   MHI08_RS08605 Genome accession   NZ_CP152022
Coordinates   1702782..1703162 (+) Length   126 a.a.
NCBI ID   WP_044335941.1    Uniprot ID   A0AAP7UKB4
Organism   Bacillus sp. FSL M7-0791     
Function   cleavage of dsDNA into ssDNA (predicted from homology)   
DNA processing

Genomic Context

Location: 1697782..1708162
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MHI08_RS08595 (MHI08_08595) - 1698279..1701422 (+) 3144 WP_056766585.1 bifunctional cytochrome P450/NADPH--P450 reductase -
  MHI08_RS08600 (MHI08_08600) - 1701616..1702524 (+) 909 WP_024425124.1 trypsin-like serine protease -
  MHI08_RS08605 (MHI08_08605) nucA/comI 1702782..1703162 (+) 381 WP_044335941.1 NucA/NucB deoxyribonuclease domain-containing protein Machinery gene
  MHI08_RS08610 (MHI08_08610) - 1703307..1704155 (+) 849 WP_056766588.1 STAS domain-containing protein -
  MHI08_RS08615 (MHI08_08615) - 1704188..1704730 (-) 543 WP_041109224.1 IseA DL-endopeptidase inhibitor family protein -
  MHI08_RS08620 (MHI08_08620) - 1705026..1705475 (+) 450 WP_056766590.1 hypothetical protein -
  MHI08_RS08625 (MHI08_08625) lexA 1705520..1706140 (-) 621 WP_034283422.1 transcriptional repressor LexA -
  MHI08_RS08630 (MHI08_08630) yneA 1706299..1706610 (+) 312 WP_024425130.1 cell division suppressor protein YneA -
  MHI08_RS08635 (MHI08_08635) - 1706628..1707275 (+) 648 WP_024427081.1 recombinase family protein -
  MHI08_RS08640 (MHI08_08640) - 1707345..1707575 (+) 231 WP_056766592.1 DUF896 domain-containing protein -

Sequence

Protein


Download         Length: 126 a.a.        Molecular weight: 13727.41 Da        Isoelectric Point: 8.5068

>NTDB_id=985328 MHI08_RS08605 WP_044335941.1 1702782..1703162(+) (nucA/comI) [Bacillus sp. FSL M7-0791]
MGTLLGGFGEKQAAKGADRYDHVVQFPKERYPETGSHIQEAIRKGHSDVCTIDRNGADARRQESLKGIPTKPGFDRDEWP
MAVCLEGGKGASVQYVSPSDNRGAGSWVGHQISGFPDGKRILFIVK

Nucleotide


Download         Length: 381 bp        

>NTDB_id=985328 MHI08_RS08605 WP_044335941.1 1702782..1703162(+) (nucA/comI) [Bacillus sp. FSL M7-0791]
ATGGGCACGTTGTTAGGTGGATTTGGAGAGAAGCAGGCAGCAAAAGGGGCTGATCGATATGATCATGTCGTTCAATTTCC
AAAGGAAAGGTACCCTGAAACAGGCAGTCATATTCAAGAAGCCATTCGAAAAGGGCATTCAGATGTGTGTACCATTGACC
GAAATGGAGCAGATGCCCGCAGGCAAGAATCATTAAAAGGAATTCCGACAAAACCTGGCTTTGACCGGGATGAATGGCCA
ATGGCGGTTTGTCTTGAGGGAGGAAAAGGAGCAAGCGTACAATATGTCAGTCCATCTGATAATAGGGGAGCAGGCTCATG
GGTCGGGCACCAAATCAGCGGGTTTCCTGATGGGAAAAGAATATTATTCATTGTGAAATAA

Domains

Predicted by InterproScan.

Deoxyribonuclease NucA/NucB (DNase_NucA_NucB)

(29-116)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nucA/comI Bacillus subtilis subsp. subtilis str. 168

57.983

94.444

0.548

Multiple sequence alignment