Detailed information    

insolico Bioinformatically predicted

Overview


Name   med   Type   Regulator
Locus tag   MHI08_RS05470 Genome accession   NZ_CP152022
Coordinates   1095749..1096711 (+) Length   320 a.a.
NCBI ID   WP_056766152.1    Uniprot ID   -
Organism   Bacillus sp. FSL M7-0791     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context


Location: 1090749..1101711
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MHI08_RS05440 (MHI08_05440) argF 1091089..1092039 (+) 951 WP_056766145.1 ornithine carbamoyltransferase -
  MHI08_RS05445 (MHI08_05445) - 1092142..1092321 (+) 180 WP_056766147.1 YjzC family protein -
  MHI08_RS05450 (MHI08_05450) - 1092485..1093750 (+) 1266 WP_047201781.1 MFS transporter -
  MHI08_RS05455 (MHI08_05455) - 1093861..1094055 (-) 195 WP_003211779.1 YjzD family protein -
  MHI08_RS05460 (MHI08_05460) - 1094268..1095008 (+) 741 WP_056766149.1 hypothetical protein -
  MHI08_RS05465 (MHI08_05465) - 1095082..1095657 (+) 576 WP_056766151.1 hypothetical protein -
  MHI08_RS05470 (MHI08_05470) med 1095749..1096711 (+) 963 WP_056766152.1 BMP family ABC transporter substrate-binding protein Regulator
  MHI08_RS05475 (MHI08_05475) comZ 1096724..1096921 (+) 198 WP_024425054.1 ComZ family protein Regulator
  MHI08_RS05480 (MHI08_05480) - 1096932..1097165 (-) 234 WP_024426489.1 hypothetical protein -
  MHI08_RS05485 (MHI08_05485) - 1097337..1098275 (+) 939 WP_024425052.1 beta-ketoacyl-ACP synthase III -
  MHI08_RS05490 (MHI08_05490) fabF 1098297..1099538 (+) 1242 WP_024425051.1 beta-ketoacyl-ACP synthase II -
  MHI08_RS05495 (MHI08_05495) - 1099616..1100419 (+) 804 WP_024425050.1 DUF2268 domain-containing protein -
  MHI08_RS05500 (MHI08_05500) - 1100569..1101549 (+) 981 WP_025093401.1 ABC transporter ATP-binding protein -

Sequence


Protein


Download         Length: 320 a.a.        Molecular weight: 35667.53 Da        Isoelectric Point: 5.0003

>NTDB_id=985313 MHI08_RS05470 WP_056766152.1 1095749..1096711(+) (med) [Bacillus sp. FSL M7-0791]
MKYQRLVMIFSFLLLLSACSQAPLKGKIEKVGLLVPDTINDQVWGTKGYKGLLSIQSTFGVDVYYKEGMVDKEKIVDAIE
EFHKKGVNLIIGHGNEYSEIFNLISEDYPNIQFITVNGNKPQAGNVTNVTFKGEAMGFFGGMTAAHMSKTKKIGILATYD
WQSEVDGFIKGAKYQDEHVQVLAEFVENWDDADKAVELYQKLKKQGVDVVYPAGDGYNIPVIEQIKADNLSAIGYVTDQS
NLGSHTVLTSTVQHVDKAYSIIAKKFNEGKLNEQDEYSFDFKEGVVEMGKFSSTIDDAFVKDIESDIVSYKKTGKLPNEK

Nucleotide


Download         Length: 963 bp        

>NTDB_id=985313 MHI08_RS05470 WP_056766152.1 1095749..1096711(+) (med) [Bacillus sp. FSL M7-0791]
ATGAAGTACCAGCGGCTTGTCATGATCTTTTCGTTCCTTCTTCTATTATCTGCCTGCTCGCAGGCGCCTTTAAAAGGAAA
AATTGAGAAGGTGGGTTTACTCGTCCCCGATACGATCAATGATCAAGTTTGGGGAACGAAAGGTTATAAAGGCTTATTAA
GTATCCAATCAACATTTGGTGTAGATGTTTATTATAAGGAAGGAATGGTCGACAAGGAGAAAATCGTTGATGCCATTGAA
GAATTCCATAAAAAAGGAGTCAATTTGATTATTGGCCATGGCAATGAATACAGTGAAATTTTTAACTTGATCAGTGAAGA
TTATCCAAACATACAATTTATTACGGTCAATGGAAACAAGCCTCAGGCGGGCAATGTCACAAACGTGACGTTTAAAGGTG
AAGCGATGGGCTTTTTCGGAGGCATGACAGCTGCACATATGTCAAAAACAAAAAAGATTGGTATTCTTGCTACATATGAT
TGGCAAAGTGAAGTAGACGGCTTTATCAAAGGAGCAAAATATCAAGATGAACATGTACAAGTATTAGCAGAGTTTGTCGA
AAACTGGGATGATGCTGACAAAGCGGTGGAGCTCTATCAAAAATTAAAAAAGCAGGGCGTTGATGTTGTGTATCCAGCAG
GTGATGGTTATAATATCCCTGTCATTGAACAAATCAAAGCCGATAATTTATCAGCGATCGGGTACGTCACCGATCAATCC
AACCTCGGCAGCCATACAGTTTTAACGAGCACTGTACAGCATGTTGATAAAGCGTATAGTATCATTGCAAAGAAGTTTAA
TGAAGGCAAGCTAAATGAACAAGATGAGTACTCCTTTGATTTTAAAGAAGGAGTGGTCGAGATGGGGAAATTTAGTTCCA
CCATTGACGACGCTTTTGTGAAAGACATTGAAAGTGATATTGTGTCATACAAAAAAACAGGTAAACTGCCAAATGAAAAG
TGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

64.537

97.813

0.631


Multiple sequence alignment