Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   MKY94_RS00840 Genome accession   NZ_CP152021
Coordinates   159672..160628 (+) Length   318 a.a.
NCBI ID   WP_144538308.1    Uniprot ID   -
Organism   Psychrobacillus sp. FSL K6-2843     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 154672..165628
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MKY94_RS00820 (MKY94_00820) - 155773..156885 (+) 1113 WP_191697316.1 dipeptide epimerase -
  MKY94_RS00825 (MKY94_00825) - 156900..157586 (+) 687 WP_340843998.1 GNAT family N-acetyltransferase -
  MKY94_RS00830 (MKY94_00830) - 157977..159212 (+) 1236 WP_151111748.1 MFS transporter -
  MKY94_RS00835 (MKY94_00835) - 159265..159387 (+) 123 WP_255475357.1 hypothetical protein -
  MKY94_RS00840 (MKY94_00840) ceuB 159672..160628 (+) 957 WP_144538308.1 ABC transporter permease Machinery gene
  MKY94_RS00845 (MKY94_00845) - 160615..161571 (+) 957 WP_154311930.1 iron chelate uptake ABC transporter family permease subunit -
  MKY94_RS00850 (MKY94_00850) - 161568..162332 (+) 765 WP_154311929.1 ATP-binding cassette domain-containing protein -
  MKY94_RS00855 (MKY94_00855) - 162551..163591 (+) 1041 WP_340843999.1 siderophore ABC transporter substrate-binding protein -
  MKY94_RS00860 (MKY94_00860) - 163858..165516 (+) 1659 WP_342577813.1 hypothetical protein -

Sequence

Protein


Download         Length: 318 a.a.        Molecular weight: 34873.99 Da        Isoelectric Point: 9.7049

>NTDB_id=985263 MKY94_RS00840 WP_144538308.1 159672..160628(+) (ceuB) [Psychrobacillus sp. FSL K6-2843]
MRLWILVVATIILSFISLFIGAIDIKPSDLLDWDSQKTQIFLMSRLPRLMAIILAGAGMGIAGLIMQSLSRNKFVSPTTA
GTLDAAKLGVIVSMIFFTNMSYMGQIFFSFTFALIGTFIFMQLLERIKFKDVIFVPLIGIMYGNIIGAISTFLGYEADVL
QNVESFFLGSFTLVVSGRYELLYVAVPAIIIAYIYANKFTVAGMGEDFAKNLGLSYRTVLNIGLVIVAIISTTVVLTVGI
IPFLGLIVPNLVSLYLGDNLRKTIPHTIFMGAAFLLACDIISRLIVHPYEIPVNTTVAVIGSAIFLIMLFRGKAYAKK

Nucleotide


Download         Length: 957 bp        

>NTDB_id=985263 MKY94_RS00840 WP_144538308.1 159672..160628(+) (ceuB) [Psychrobacillus sp. FSL K6-2843]
ATGAGATTATGGATATTAGTAGTAGCAACTATTATCCTATCCTTTATTTCGCTATTTATAGGAGCCATTGATATTAAACC
GAGTGATCTGCTTGATTGGGACTCCCAAAAGACCCAAATCTTTTTAATGAGTCGATTGCCACGCTTAATGGCAATTATAT
TAGCTGGTGCAGGAATGGGTATTGCGGGCTTAATTATGCAAAGCTTAAGCCGAAACAAATTCGTATCACCGACAACGGCT
GGTACACTTGATGCAGCAAAACTAGGTGTTATAGTTTCGATGATATTCTTTACAAATATGTCTTATATGGGACAGATTTT
CTTTAGTTTTACATTTGCTCTAATTGGAACTTTTATCTTTATGCAATTGCTTGAGCGTATTAAATTTAAGGATGTTATTT
TCGTACCTTTAATCGGTATTATGTACGGTAATATCATTGGGGCCATCTCAACATTCTTAGGATATGAAGCAGATGTTTTA
CAAAACGTTGAATCATTCTTTTTAGGGAGCTTTACATTAGTTGTCTCTGGGCGCTATGAATTACTATACGTAGCTGTACC
AGCGATTATTATTGCTTATATTTATGCAAATAAATTCACTGTAGCTGGTATGGGTGAGGATTTTGCAAAAAACTTAGGTC
TAAGTTATCGTACAGTGTTAAATATAGGTCTTGTTATTGTAGCGATAATTTCTACAACGGTTGTTTTAACAGTAGGTATT
ATCCCATTCTTAGGTTTAATCGTTCCTAACCTTGTTTCTTTGTATCTGGGAGATAATTTACGCAAGACAATACCGCATAC
TATTTTCATGGGTGCTGCATTCTTACTCGCATGTGATATTATAAGCCGTTTAATTGTCCATCCATATGAAATTCCGGTAA
ATACAACAGTCGCCGTAATTGGCAGTGCGATCTTCTTAATTATGTTGTTTAGGGGGAAAGCATATGCGAAAAAATAG

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.532

99.371

0.522

Multiple sequence alignment