Detailed information NTG0985162

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ACN9L4_RS14785
• Genome accession: NZ_CP184109
• Coordinates: 3006871..3007896 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644908.1
• Uniprot ID: -
• Organism: Escherichia coli strain AZ 189
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 3001871..3012896

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACN9L4_RS14755 (ACN9L4_14755)	zapB	3001955..3002200 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
ACN9L4_RS14760 (ACN9L4_14760)	rraA	3002285..3002770 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ACN9L4_RS14765 (ACN9L4_14765)	menA	3002863..3003789 (-)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ACN9L4_RS14770 (ACN9L4_14770)	hslU	3003856..3005187 (-)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
ACN9L4_RS14775 (ACN9L4_14775)	hslV	3005197..3005727 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ACN9L4_RS14780 (ACN9L4_14780)	ftsN	3005820..3006779 (-)	960	WP_000068834.1	cell division protein FtsN	-
ACN9L4_RS14785 (ACN9L4_14785)	cytR	3006871..3007896 (-)	1026	WP_000644908.1	DNA-binding transcriptional regulator CytR	Regulator
ACN9L4_RS14790 (ACN9L4_14790)	priA	3008052..3010250 (-)	2199	WP_001296625.1	primosomal protein N'	Machinery gene
ACN9L4_RS14795 (ACN9L4_14795)	rpmE	3010453..3010665 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
ACN9L4_RS14800 (ACN9L4_14800)	yiiX	3010726..3011334 (-)	609	WP_000702314.1	YiiX family permuted papain-like enzyme	-
ACN9L4_RS14805 (ACN9L4_14805)	metJ	3011394..3011711 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37847.80 Da
• Isoelectric Point: 6.3842

>NTDB_id=985162 ACN9L4_RS14785 WP_000644908.1 3006871..3007896(-) (cytR) [Escherichia coli strain AZ 189]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSRAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=985162 ACN9L4_RS14785 WP_000644908.1 3006871..3007896(-) (cytR) [Escherichia coli strain AZ 189]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAGAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGTCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625