Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   MKZ10_RS00440 Genome accession   NZ_CP152017
Coordinates   77618..78568 (-) Length   316 a.a.
NCBI ID   WP_342506816.1    Uniprot ID   -
Organism   Sporosarcina sp. FSL K6-2383     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 72618..83568
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MKZ10_RS00425 (MKZ10_00425) - 74920..75897 (-) 978 WP_342506813.1 siderophore ABC transporter substrate-binding protein -
  MKZ10_RS00430 (MKZ10_00430) - 75917..76678 (-) 762 WP_342506814.1 ATP-binding cassette domain-containing protein -
  MKZ10_RS00435 (MKZ10_00435) - 76675..77625 (-) 951 WP_342506815.1 iron chelate uptake ABC transporter family permease subunit -
  MKZ10_RS00440 (MKZ10_00440) ceuB 77618..78568 (-) 951 WP_342506816.1 ABC transporter permease Machinery gene
  MKZ10_RS00445 (MKZ10_00445) - 78939..79814 (-) 876 WP_342506818.1 DUF6612 family protein -
  MKZ10_RS00450 (MKZ10_00450) - 80048..81766 (+) 1719 WP_342506820.1 ABC transporter ATP-binding protein -
  MKZ10_RS00455 (MKZ10_00455) - 81980..82399 (-) 420 WP_342506822.1 NUDIX domain-containing protein -
  MKZ10_RS00460 (MKZ10_00460) - 82476..82940 (-) 465 WP_342506824.1 NUDIX hydrolase -
  MKZ10_RS00465 (MKZ10_00465) - 83240..83527 (-) 288 WP_342506826.1 hypothetical protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34945.31 Da        Isoelectric Point: 10.2187

>NTDB_id=985099 MKZ10_RS00440 WP_342506816.1 77618..78568(-) (ceuB) [Sporosarcina sp. FSL K6-2383]
MKKRYLIVAVITLSFLSLFVGVSRITPMDLLDFKSEQTEIFLISRLPRLVAILLAGAGMSIAGLIMQQLSRNKFVSPTTA
GTLDATRLGILVSMLLFANASTIEKMIVAFVFALAGTLLFMQILDRIKFKDAIFIPLVGLMFGNILSSITTFFAYKADVI
QNMSAWLQGDFSMIMKGRYELLYISIPVLIVTYLYANRFTVAGMGEDFSKNLGLAYRRIVNIGLILVALITTTVVLTVGM
IPFLGLIIPNIVSIFKGDHLQKTLPHTALLGAIFLLVCDILGRVLIYPYEISISLMVGVIGSAIFLYLLFRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=985099 MKZ10_RS00440 WP_342506816.1 77618..78568(-) (ceuB) [Sporosarcina sp. FSL K6-2383]
ATGAAGAAACGTTATTTGATAGTCGCAGTTATCACTCTTTCATTCCTATCGCTCTTTGTAGGGGTGAGCCGTATTACACC
GATGGATCTGTTGGACTTCAAATCGGAACAAACGGAAATATTCTTAATTAGCCGTCTGCCAAGACTGGTCGCCATTCTTC
TTGCTGGAGCAGGGATGAGTATCGCAGGTCTCATTATGCAGCAGCTAAGCCGGAATAAATTCGTTTCTCCAACGACAGCA
GGAACGCTGGATGCAACACGTCTTGGGATTCTCGTCTCGATGTTGTTATTTGCGAACGCATCCACGATTGAAAAAATGAT
CGTCGCTTTTGTATTTGCGCTTGCCGGCACGTTACTGTTTATGCAAATTCTGGACCGCATCAAGTTCAAGGACGCGATTT
TCATTCCACTTGTCGGGCTGATGTTCGGAAATATTCTATCGTCGATTACGACGTTTTTTGCCTATAAGGCGGATGTCATC
CAAAATATGTCGGCATGGCTACAAGGTGATTTTTCGATGATTATGAAAGGACGTTACGAACTTCTATACATAAGTATTCC
GGTGCTCATCGTAACCTATCTCTACGCCAATCGATTTACAGTGGCTGGAATGGGGGAAGATTTCTCGAAAAACCTCGGAC
TTGCTTATAGACGGATCGTCAATATCGGATTAATACTGGTTGCACTTATTACGACAACGGTCGTATTAACAGTCGGAATG
ATTCCATTCCTTGGATTGATCATTCCGAATATCGTCTCTATATTCAAAGGAGATCATTTACAAAAAACATTACCGCATAC
TGCTTTACTCGGTGCAATCTTCCTACTCGTATGTGATATTTTGGGCAGAGTCCTCATCTATCCTTACGAAATTTCCATCA
GTTTGATGGTTGGCGTCATCGGCAGTGCAATCTTCCTCTACTTATTGTTTAGGAGGAAGGCCTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

53.994

99.051

0.535

Multiple sequence alignment