Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | MKY83_RS11670 | Genome accession | NZ_CP152015 |
| Coordinates | 2300233..2300568 (+) | Length | 111 a.a. |
| NCBI ID | WP_012010555.1 | Uniprot ID | - |
| Organism | Bacillus sp. FSL M8-0266 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2295233..2305568
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MKY83_RS11650 (MKY83_11650) | gcvT | 2295712..2296809 (-) | 1098 | WP_065098395.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| MKY83_RS11655 (MKY83_11655) | - | 2297370..2299040 (+) | 1671 | WP_342487371.1 | SNF2-related protein | - |
| MKY83_RS11660 (MKY83_11660) | - | 2299055..2299852 (+) | 798 | WP_065098397.1 | YqhG family protein | - |
| MKY83_RS11665 (MKY83_11665) | - | 2300035..2300199 (+) | 165 | WP_003217357.1 | anti-repressor SinI family protein | - |
| MKY83_RS11670 (MKY83_11670) | sinR | 2300233..2300568 (+) | 336 | WP_012010555.1 | transcriptional regulator SinR | Regulator |
| MKY83_RS11675 (MKY83_11675) | - | 2300636..2301436 (-) | 801 | WP_044140977.1 | TasA family protein | - |
| MKY83_RS11680 (MKY83_11680) | - | 2301495..2302067 (-) | 573 | WP_044140976.1 | signal peptidase I | - |
| MKY83_RS11685 (MKY83_11685) | tapA | 2302119..2302646 (-) | 528 | WP_044140975.1 | amyloid fiber anchoring/assembly protein TapA | - |
| MKY83_RS11690 (MKY83_11690) | - | 2302946..2303224 (+) | 279 | WP_065098439.1 | DUF3889 domain-containing protein | - |
| MKY83_RS11695 (MKY83_11695) | - | 2303258..2303452 (-) | 195 | WP_044140973.1 | YqzE family protein | - |
| MKY83_RS11700 (MKY83_11700) | comGG | 2303512..2303895 (-) | 384 | WP_044140972.1 | competence type IV pilus minor pilin ComGG | - |
| MKY83_RS11705 (MKY83_11705) | comGF | 2303892..2304392 (-) | 501 | WP_044140971.1 | competence type IV pilus minor pilin ComGF | - |
| MKY83_RS11710 (MKY83_11710) | comGE | 2304331..2304648 (-) | 318 | WP_044140968.1 | competence type IV pilus minor pilin ComGE | - |
| MKY83_RS11715 (MKY83_11715) | comGD | 2304632..2305078 (-) | 447 | WP_106065588.1 | competence type IV pilus minor pilin ComGD | - |
| MKY83_RS11720 (MKY83_11720) | comGC | 2305071..2305364 (-) | 294 | WP_003217322.1 | competence type IV pilus major pilin ComGC | Machinery gene |
Sequence
Protein
Download Length: 111 a.a. Molecular weight: 13001.59 Da Isoelectric Point: 5.2831
>NTDB_id=985033 MKY83_RS11670 WP_012010555.1 2300233..2300568(+) (sinR) [Bacillus sp. FSL M8-0266]
MIGQRIKQYRNEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLHEKDETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQIWRKKQEEE
MIGQRIKQYRNEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLHEKDETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQIWRKKQEEE
Nucleotide
Download Length: 336 bp
>NTDB_id=985033 MKY83_RS11670 WP_012010555.1 2300233..2300568(+) (sinR) [Bacillus sp. FSL M8-0266]
TTGATTGGCCAGCGTATTAAACAATACCGCAATGAAAAAGGCTACTCACTATCAGAACTGGCCGAAAAGGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAAAGAAACTTGCAAACAAACCCCTCCATTCAATTTCTTGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACACTGTTACACGAAAAAGATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAAAAA
CTAGTTCGAGATGCAATGACATCAGGGGTTTCGAAGAAGCAATTTCGTGAATTTTTAGATTATCAAATCTGGAGAAAAAA
GCAAGAAGAGGAGTAA
TTGATTGGCCAGCGTATTAAACAATACCGCAATGAAAAAGGCTACTCACTATCAGAACTGGCCGAAAAGGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAAAGAAACTTGCAAACAAACCCCTCCATTCAATTTCTTGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACACTGTTACACGAAAAAGATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAAAAA
CTAGTTCGAGATGCAATGACATCAGGGGTTTCGAAGAAGCAATTTCGTGAATTTTTAGATTATCAAATCTGGAGAAAAAA
GCAAGAAGAGGAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
94.595 |
100 |
0.946 |