Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   MKY83_RS05550 Genome accession   NZ_CP152015
Coordinates   1149214..1149411 (+) Length   65 a.a.
NCBI ID   WP_003211983.1    Uniprot ID   -
Organism   Bacillus sp. FSL M8-0266     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1144214..1154411
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MKY83_RS05520 (MKY83_05520) - 1144622..1144801 (+) 180 WP_003211282.1 YjzC family protein -
  MKY83_RS05525 (MKY83_05525) - 1144971..1146236 (+) 1266 WP_065098863.1 MFS transporter -
  MKY83_RS05530 (MKY83_05530) - 1146353..1146547 (-) 195 WP_003211779.1 YjzD family protein -
  MKY83_RS05535 (MKY83_05535) - 1146759..1147499 (+) 741 WP_003211061.1 hypothetical protein -
  MKY83_RS05540 (MKY83_05540) - 1147575..1148150 (+) 576 WP_065098862.1 nad binding enzyme -
  MKY83_RS05545 (MKY83_05545) med 1148241..1149203 (+) 963 WP_106067197.1 BMP family ABC transporter substrate-binding protein Regulator
  MKY83_RS05550 (MKY83_05550) comZ 1149214..1149411 (+) 198 WP_003211983.1 ComZ family protein Regulator
  MKY83_RS05555 (MKY83_05555) - 1149422..1149655 (-) 234 WP_065098860.1 hypothetical protein -
  MKY83_RS05560 (MKY83_05560) - 1149825..1150763 (+) 939 WP_003212296.1 beta-ketoacyl-ACP synthase III -
  MKY83_RS05565 (MKY83_05565) fabF 1150785..1152026 (+) 1242 WP_003211631.1 beta-ketoacyl-ACP synthase II -
  MKY83_RS05570 (MKY83_05570) - 1152104..1152898 (+) 795 WP_044139924.1 DUF2268 domain-containing protein -
  MKY83_RS05575 (MKY83_05575) - 1153069..1154049 (+) 981 WP_044139925.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 65 a.a.        Molecular weight: 7391.42 Da        Isoelectric Point: 4.1652

>NTDB_id=985015 MKY83_RS05550 WP_003211983.1 1149214..1149411(+) (comZ) [Bacillus sp. FSL M8-0266]
MQHEKSMEFLQIAMKYFPQAKEELDKAGIQLEPEALQPLLSLFTSVMQEAYELGKADAESEKATE

Nucleotide


Download         Length: 198 bp        

>NTDB_id=985015 MKY83_RS05550 WP_003211983.1 1149214..1149411(+) (comZ) [Bacillus sp. FSL M8-0266]
ATGCAGCACGAAAAATCGATGGAATTTTTACAAATTGCCATGAAGTATTTTCCGCAGGCAAAAGAAGAATTAGATAAAGC
AGGTATTCAGCTTGAGCCCGAAGCTCTTCAGCCGCTTTTATCATTGTTTACATCTGTTATGCAAGAGGCTTATGAGCTTG
GAAAAGCAGATGCAGAATCAGAAAAAGCCACAGAATAG

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

72.131

93.846

0.677

Multiple sequence alignment