Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   MKX52_RS06680 Genome accession   NZ_CP152014
Coordinates   1329386..1329967 (+) Length   193 a.a.
NCBI ID   WP_144469938.1    Uniprot ID   -
Organism   Bacillus sp. FSL R5-0422     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1324386..1334967
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MKX52_RS06650 (MKX52_06650) dapD 1324510..1325220 (+) 711 WP_012009788.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  MKX52_RS06655 (MKX52_06655) - 1325253..1326431 (+) 1179 WP_049754900.1 N-acetyldiaminopimelate deacetylase -
  MKX52_RS06660 (MKX52_06660) - 1326482..1326724 (+) 243 WP_003211408.1 YkuS family protein -
  MKX52_RS06665 (MKX52_06665) - 1326751..1327560 (-) 810 WP_088003924.1 mechanosensitive ion channel family protein -
  MKX52_RS06670 (MKX52_06670) ahpA 1327832..1328374 (+) 543 WP_003211758.1 biofilm-specific peroxidase AhpA -
  MKX52_RS06675 (MKX52_06675) - 1328457..1328915 (+) 459 WP_012009791.1 TlpA disulfide reductase family protein -
  MKX52_RS06680 (MKX52_06680) rok 1329386..1329967 (+) 582 WP_144469938.1 transcriptional regulator Rok Regulator
  MKX52_RS06685 (MKX52_06685) - 1330018..1330935 (-) 918 WP_342491704.1 sigmaE regulated sporulation protein -
  MKX52_RS06690 (MKX52_06690) - 1331020..1331601 (+) 582 WP_224925213.1 molybdenum cofactor guanylyltransferase -
  MKX52_RS06695 (MKX52_06695) - 1331631..1332647 (+) 1017 WP_144455899.1 thiazole biosynthesis adenylyltransferase ThiF -
  MKX52_RS06700 (MKX52_06700) glp 1332657..1333934 (+) 1278 WP_342491705.1 gephyrin-like molybdotransferase Glp -
  MKX52_RS06705 (MKX52_06705) mobB 1333916..1334440 (+) 525 WP_088003916.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  MKX52_RS06710 (MKX52_06710) - 1334437..1334928 (+) 492 WP_012009798.1 molybdenum cofactor biosynthesis protein MoaE -

Sequence

Protein


Download         Length: 193 a.a.        Molecular weight: 21804.74 Da        Isoelectric Point: 9.7309

>NTDB_id=984962 MKX52_RS06680 WP_144469938.1 1329386..1329967(+) (rok) [Bacillus sp. FSL R5-0422]
MFNEREALRLRLEQLNEAEVKVIREYQIERDAIYAKLRELDRQGTGLVSDTKKEVRTERKTDSLPVLAELAAQEMRSYQP
PAQSQSNSASSLGTGQLNGTPVGIPEGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNM
TTFMQSLIKMYPEVKKPYRGQYILEGDIQTEDE

Nucleotide


Download         Length: 582 bp        

>NTDB_id=984962 MKX52_RS06680 WP_144469938.1 1329386..1329967(+) (rok) [Bacillus sp. FSL R5-0422]
TTGTTTAATGAGAGGGAAGCGTTACGATTACGATTGGAACAATTAAACGAGGCAGAAGTAAAGGTCATCCGTGAATATCA
AATTGAGCGAGATGCGATTTATGCAAAATTAAGAGAATTAGACCGTCAAGGAACAGGTCTAGTGTCAGATACAAAAAAAG
AAGTGCGTACAGAAAGAAAAACGGATTCACTGCCTGTATTAGCTGAGCTGGCTGCACAGGAAATGAGAAGTTACCAGCCG
CCTGCACAATCACAATCTAATTCTGCATCATCTTTAGGAACAGGGCAGCTAAACGGTACACCTGTAGGTATTCCTGAAGG
ATCTACAAGACGTAGAAGAGGCACAGCCCGCCCTGGTTCAAAGGCAGCTAAACTTCGTGAAGCTGCAATTAAAACGTTAA
AGCGTCATAATGCGGCGATTAAAAGCTCTGAACTTCAAAAAGAAATTGAAAAAGAGAGCGGTCTTGAAATTCCAAATATG
ACAACGTTTATGCAAAGCTTAATTAAAATGTATCCTGAAGTGAAAAAGCCATATCGCGGACAGTATATTCTAGAAGGCGA
TATTCAAACAGAAGACGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

78.421

98.446

0.772

Multiple sequence alignment