Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   MKX52_RS06560 Genome accession   NZ_CP152014
Coordinates   1311049..1311510 (-) Length   153 a.a.
NCBI ID   WP_012009774.1    Uniprot ID   A0AAE4B719
Organism   Bacillus sp. FSL R5-0422     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1306049..1316510
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MKX52_RS06535 (MKX52_06535) - 1306657..1307541 (+) 885 WP_144503361.1 cation diffusion facilitator family transporter -
  MKX52_RS06540 (MKX52_06540) - 1307603..1307755 (-) 153 WP_169056411.1 hypothetical protein -
  MKX52_RS06545 (MKX52_06545) - 1308057..1308596 (+) 540 WP_012009771.1 RDD family protein -
  MKX52_RS06550 (MKX52_06550) - 1308722..1310032 (+) 1311 WP_144503360.1 MFS transporter -
  MKX52_RS06555 (MKX52_06555) - 1310106..1311014 (+) 909 WP_012009773.1 chemotaxis protein -
  MKX52_RS06560 (MKX52_06560) kre 1311049..1311510 (-) 462 WP_012009774.1 YkyB family protein Regulator
  MKX52_RS06565 (MKX52_06565) - 1312011..1312226 (-) 216 WP_012009775.1 hypothetical protein -
  MKX52_RS06570 (MKX52_06570) - 1312402..1312569 (+) 168 WP_342491699.1 hypothetical protein -
  MKX52_RS06575 (MKX52_06575) - 1312634..1313911 (-) 1278 WP_342491700.1 MFS transporter -
  MKX52_RS06580 (MKX52_06580) - 1313985..1314482 (-) 498 WP_342491701.1 L,D-transpeptidase family protein -
  MKX52_RS06585 (MKX52_06585) - 1314639..1315496 (-) 858 WP_012009779.1 metallophosphoesterase -
  MKX52_RS06590 (MKX52_06590) fadH 1315633..1316397 (+) 765 WP_012009780.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 153 a.a.        Molecular weight: 17741.33 Da        Isoelectric Point: 10.2452

>NTDB_id=984961 MKX52_RS06560 WP_012009774.1 1311049..1311510(-) (kre) [Bacillus sp. FSL R5-0422]
MDDYAHTKDIEPTAENIAKAIYTVNRHAKTAPNPKFLYLLKKRALQKLLQEGKGRKVGLHFSNNPKYSQQQSDVLIEIGD
YYFHLPPTKEDFEFLPHLGNLNQSYRNPKANMSLNRAKQLLQTYVGLKEKPTATKQKSHYTKPVFKRLGESYF

Nucleotide


Download         Length: 462 bp        

>NTDB_id=984961 MKX52_RS06560 WP_012009774.1 1311049..1311510(-) (kre) [Bacillus sp. FSL R5-0422]
ATGGACGATTATGCTCATACTAAAGACATAGAACCTACAGCAGAAAACATCGCAAAAGCCATTTATACTGTTAACCGCCA
TGCTAAAACCGCACCAAATCCCAAATTTCTTTATCTTTTGAAAAAACGTGCGCTGCAGAAACTATTGCAAGAAGGTAAAG
GAAGAAAAGTGGGCCTACATTTCTCTAACAATCCCAAATATAGTCAACAACAGTCCGACGTGCTGATTGAAATTGGAGAT
TATTATTTTCACCTGCCACCAACTAAAGAAGACTTCGAATTTTTGCCACACTTAGGAAATTTAAATCAATCATATCGCAA
TCCGAAAGCGAATATGTCATTAAACCGAGCAAAGCAACTGCTTCAAACGTATGTCGGTTTAAAAGAAAAACCTACCGCCA
CAAAACAAAAATCACATTATACAAAGCCCGTCTTCAAACGACTCGGGGAAAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

76.623

100

0.771

Multiple sequence alignment