Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   MKX52_RS05395 Genome accession   NZ_CP152014
Coordinates   1094862..1095059 (+) Length   65 a.a.
NCBI ID   WP_003211983.1    Uniprot ID   -
Organism   Bacillus sp. FSL R5-0422     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1089862..1100059
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MKX52_RS05365 (MKX52_05365) - 1090273..1090452 (+) 180 WP_003211282.1 YjzC family protein -
  MKX52_RS05370 (MKX52_05370) - 1090622..1091887 (+) 1266 WP_342491623.1 MFS transporter -
  MKX52_RS05375 (MKX52_05375) - 1092001..1092195 (-) 195 WP_003211779.1 YjzD family protein -
  MKX52_RS05380 (MKX52_05380) - 1092407..1093147 (+) 741 WP_342491624.1 hypothetical protein -
  MKX52_RS05385 (MKX52_05385) - 1093223..1093798 (+) 576 WP_342491625.1 nad binding enzyme -
  MKX52_RS05390 (MKX52_05390) med 1093889..1094851 (+) 963 WP_211063171.1 BMP family ABC transporter substrate-binding protein Regulator
  MKX52_RS05395 (MKX52_05395) comZ 1094862..1095059 (+) 198 WP_003211983.1 ComZ family protein Regulator
  MKX52_RS05400 (MKX52_05400) - 1095070..1095303 (-) 234 WP_088002067.1 hypothetical protein -
  MKX52_RS05405 (MKX52_05405) - 1095473..1096411 (+) 939 WP_106041570.1 beta-ketoacyl-ACP synthase III -
  MKX52_RS05410 (MKX52_05410) fabF 1096433..1097674 (+) 1242 WP_012009553.1 beta-ketoacyl-ACP synthase II -
  MKX52_RS05415 (MKX52_05415) - 1097752..1098555 (+) 804 WP_119124687.1 DUF2268 domain-containing protein -
  MKX52_RS05420 (MKX52_05420) - 1098717..1099697 (+) 981 WP_342491626.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 65 a.a.        Molecular weight: 7391.42 Da        Isoelectric Point: 4.1652

>NTDB_id=984954 MKX52_RS05395 WP_003211983.1 1094862..1095059(+) (comZ) [Bacillus sp. FSL R5-0422]
MQHEKSMEFLQIAMKYFPQAKEELDKAGIQLEPEALQPLLSLFTSVMQEAYELGKADAESEKATE

Nucleotide


Download         Length: 198 bp        

>NTDB_id=984954 MKX52_RS05395 WP_003211983.1 1094862..1095059(+) (comZ) [Bacillus sp. FSL R5-0422]
ATGCAACACGAAAAATCGATGGAGTTTTTACAAATTGCCATGAAGTATTTTCCGCAGGCAAAAGAAGAATTAGATAAAGC
AGGTATTCAGCTTGAGCCTGAAGCTCTTCAGCCGCTTTTATCATTGTTTACATCTGTTATGCAAGAGGCATATGAGCTTG
GAAAAGCAGATGCAGAATCAGAAAAAGCCACAGAATAG

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

72.131

93.846

0.677

Multiple sequence alignment