Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   MKX52_RS04025 Genome accession   NZ_CP152014
Coordinates   833273..834064 (+) Length   263 a.a.
NCBI ID   WP_342491540.1    Uniprot ID   -
Organism   Bacillus sp. FSL R5-0422     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 828273..839064
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MKX52_RS03990 (MKX52_03990) - 828359..828907 (+) 549 WP_012009313.1 thioredoxin family protein -
  MKX52_RS03995 (MKX52_03995) - 829244..829711 (+) 468 WP_216888531.1 DUF393 domain-containing protein -
  MKX52_RS04000 (MKX52_04000) - 829748..831004 (-) 1257 WP_251184564.1 transcriptional regulator -
  MKX52_RS04005 (MKX52_04005) - 831277..831864 (+) 588 WP_342491539.1 nitroreductase -
  MKX52_RS04010 (MKX52_04010) - 831902..832057 (-) 156 WP_012009317.1 YfhD family protein -
  MKX52_RS04015 (MKX52_04015) - 832119..832229 (-) 111 WP_017358836.1 YfhE family protein -
  MKX52_RS04020 (MKX52_04020) - 832282..833178 (-) 897 WP_144522557.1 TIGR01777 family oxidoreductase -
  MKX52_RS04025 (MKX52_04025) recX 833273..834064 (+) 792 WP_342491540.1 recombination regulator RecX Regulator
  MKX52_RS04030 (MKX52_04030) - 834068..834382 (+) 315 WP_012009321.1 YfhH family protein -
  MKX52_RS04035 (MKX52_04035) - 834405..834578 (-) 174 WP_012009322.1 YpzG family protein -
  MKX52_RS04040 (MKX52_04040) - 834604..834753 (-) 150 WP_144504392.1 small, acid-soluble spore protein K -
  MKX52_RS04045 (MKX52_04045) - 834870..835142 (+) 273 WP_342491541.1 YfhJ family protein -
  MKX52_RS04050 (MKX52_04050) - 835433..836416 (+) 984 WP_003217835.1 glycosyltransferase family 2 protein -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30776.20 Da        Isoelectric Point: 6.7755

>NTDB_id=984945 MKX52_RS04025 WP_342491540.1 833273..834064(+) (recX) [Bacillus sp. FSL R5-0422]
MPYITKISAQKNNTERVNIFLDEKYAFSVDLDVLVQHDLKKGKELDEADIIDIQFGDAVKKGFQQAVDYLSYRMRSVKEV
TDYLTKKEIPTPAISEIIHKLKHYKYVNDLEFAEAYVSTHRKTNSKGPSVLKKELKLKGIEDDHIEQALSQYPDDLQLEE
AVKQVQKLVRKEKNRSTKEIEQRIKLQLQRKGFSFEIIDKALQEAYDGQEEEKEEEALLYMMEKAKRKVGYDGSFEKKMK
VKQFLFRKGFDLDTIDHVLDKGE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=984945 MKX52_RS04025 WP_342491540.1 833273..834064(+) (recX) [Bacillus sp. FSL R5-0422]
ATGCCCTATATTACAAAAATCTCCGCTCAGAAAAACAATACAGAGCGGGTGAACATCTTTCTTGATGAAAAGTACGCCTT
TAGCGTGGATCTAGATGTGCTCGTTCAGCACGATTTGAAAAAAGGAAAAGAGCTGGATGAAGCCGATATCATCGACATTC
AATTCGGTGATGCTGTGAAAAAAGGATTTCAGCAGGCCGTCGATTATTTATCCTACCGAATGAGATCAGTGAAAGAAGTC
ACCGATTATTTGACGAAAAAAGAAATCCCGACACCTGCCATTAGTGAAATTATACACAAATTAAAGCATTACAAGTATGT
AAATGATCTCGAATTTGCAGAAGCTTATGTCAGTACCCATCGTAAAACGAACAGCAAAGGGCCATCCGTTCTGAAAAAAG
AGCTAAAGCTCAAAGGAATAGAGGATGACCACATTGAACAAGCACTATCACAATATCCTGATGACTTACAGCTGGAGGAG
GCTGTGAAGCAGGTTCAAAAGCTTGTGAGAAAAGAAAAAAATCGTTCCACAAAAGAAATCGAGCAGCGCATCAAACTTCA
GCTGCAGCGAAAGGGATTTTCGTTTGAGATCATTGATAAAGCCCTTCAAGAAGCCTATGATGGACAAGAAGAGGAAAAGG
AAGAAGAAGCGCTCCTTTATATGATGGAGAAGGCAAAACGCAAGGTAGGATACGACGGATCATTTGAAAAGAAGATGAAG
GTGAAGCAATTTTTATTCAGAAAAGGCTTTGATCTCGACACAATTGATCACGTTTTAGACAAAGGGGAATGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

62.738

100

0.627

Multiple sequence alignment