Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | MKX52_RS00255 | Genome accession | NZ_CP152014 |
| Coordinates | 47137..47427 (-) | Length | 96 a.a. |
| NCBI ID | WP_087975202.1 | Uniprot ID | - |
| Organism | Bacillus sp. FSL R5-0422 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 42137..52427
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MKX52_RS00215 (MKX52_00215) | - | 42172..42501 (+) | 330 | WP_012008640.1 | cyclic-di-AMP receptor | - |
| MKX52_RS00220 (MKX52_00220) | - | 42514..42954 (+) | 441 | WP_088000675.1 | YaaR family protein | - |
| MKX52_RS00225 (MKX52_00225) | holB | 42966..43955 (+) | 990 | WP_342491247.1 | DNA polymerase III subunit delta' | - |
| MKX52_RS00230 (MKX52_00230) | - | 43958..44785 (+) | 828 | WP_012008643.1 | stage 0 sporulation family protein | - |
| MKX52_RS00235 (MKX52_00235) | yabA | 44800..45153 (+) | 354 | WP_342491248.1 | DNA replication initiation control protein YabA | - |
| MKX52_RS00240 (MKX52_00240) | - | 45209..45952 (+) | 744 | WP_342491249.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| MKX52_RS00245 (MKX52_00245) | - | 45939..46235 (+) | 297 | WP_144458079.1 | GIY-YIG nuclease family protein | - |
| MKX52_RS00250 (MKX52_00250) | rsmI | 46213..47091 (+) | 879 | WP_144458081.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| MKX52_RS00255 (MKX52_00255) | abrB | 47137..47427 (-) | 291 | WP_087975202.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Regulator |
| MKX52_RS00260 (MKX52_00260) | metG | 47948..49948 (+) | 2001 | WP_342491250.1 | methionine--tRNA ligase | - |
| MKX52_RS00265 (MKX52_00265) | - | 50030..50797 (+) | 768 | WP_144458085.1 | TatD family hydrolase | - |
| MKX52_RS00270 (MKX52_00270) | - | 51042..52244 (+) | 1203 | WP_012008649.1 | G5 and 3D domain-containing protein | - |
Sequence
Protein
Download Length: 96 a.a. Molecular weight: 10853.65 Da Isoelectric Point: 7.9655
>NTDB_id=984940 MKX52_RS00255 WP_087975202.1 47137..47427(-) (abrB) [Bacillus sp. FSL R5-0422]
MKMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLANGKLVLSREG
AEQIINEIQNQLQSQK
MKMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLANGKLVLSREG
AEQIINEIQNQLQSQK
Nucleotide
Download Length: 291 bp
>NTDB_id=984940 MKX52_RS00255 WP_087975202.1 47137..47427(-) (abrB) [Bacillus sp. FSL R5-0422]
ATGAAGATGAAATCTACAGGTATTGTACGTAAAGTTGACGAATTAGGGCGCGTGGTGATTCCAATCGAACTTCGCCGTAC
TCTAGGAATCGCTGAAAAAGACGCTTTGGAAATTTATGTTGATGATGAAAAAATTATCCTAAAAAAATATAAACCAAACA
TGACTTGCCAAGTTACAGGTGAAGTATCAGACGATAACCTTAAACTTGCTAATGGTAAATTAGTTCTTAGCCGTGAAGGT
GCAGAGCAAATCATTAACGAAATCCAAAACCAACTTCAATCACAAAAATAA
ATGAAGATGAAATCTACAGGTATTGTACGTAAAGTTGACGAATTAGGGCGCGTGGTGATTCCAATCGAACTTCGCCGTAC
TCTAGGAATCGCTGAAAAAGACGCTTTGGAAATTTATGTTGATGATGAAAAAATTATCCTAAAAAAATATAAACCAAACA
TGACTTGCCAAGTTACAGGTGAAGTATCAGACGATAACCTTAAACTTGCTAATGGTAAATTAGTTCTTAGCCGTGAAGGT
GCAGAGCAAATCATTAACGAAATCCAAAACCAACTTCAATCACAAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
93.75 |
100 |
0.938 |