Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   NYE28_RS04330 Genome accession   NZ_CP152013
Coordinates   854465..855256 (+) Length   263 a.a.
NCBI ID   WP_342490313.1    Uniprot ID   -
Organism   Bacillus sp. FSL R5-0443     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 849465..860256
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NYE28_RS04305 (NYE28_04305) - 851458..852342 (+) 885 WP_025284444.1 PhzF family phenazine biosynthesis isomerase -
  NYE28_RS04310 (NYE28_04310) - 852419..853003 (+) 585 WP_007408549.1 nitroreductase -
  NYE28_RS04315 (NYE28_04315) - 853044..853235 (-) 192 WP_003155508.1 YfhD family protein -
  NYE28_RS04320 (NYE28_04320) - 853306..853416 (-) 111 WP_003155504.1 YfhE family protein -
  NYE28_RS04325 (NYE28_04325) - 853474..854373 (-) 900 WP_025284445.1 TIGR01777 family oxidoreductase -
  NYE28_RS04330 (NYE28_04330) recX 854465..855256 (+) 792 WP_342490313.1 recombination regulator RecX Regulator
  NYE28_RS04335 (NYE28_04335) - 855263..855577 (+) 315 WP_007408553.1 YfhH family protein -
  NYE28_RS04340 (NYE28_04340) - 855721..856914 (+) 1194 WP_160223385.1 MFS transporter -
  NYE28_RS04345 (NYE28_04345) - 856954..857343 (-) 390 WP_043020687.1 DUF2606 family protein -
  NYE28_RS04350 (NYE28_04350) - 857306..858217 (-) 912 WP_160222922.1 serine protease -
  NYE28_RS04355 (NYE28_04355) - 858365..858517 (-) 153 WP_003155495.1 small, acid-soluble spore protein K -
  NYE28_RS04360 (NYE28_04360) - 858641..858910 (+) 270 WP_003155492.1 YfhJ family protein -
  NYE28_RS04365 (NYE28_04365) - 859043..859570 (+) 528 WP_015417063.1 SH3 domain-containing protein -
  NYE28_RS04370 (NYE28_04370) - 859656..859991 (+) 336 WP_043020688.1 SdpI family protein -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30949.13 Da        Isoelectric Point: 5.8054

>NTDB_id=984875 NYE28_RS04330 WP_342490313.1 854465..855256(+) (recX) [Bacillus sp. FSL R5-0443]
MPFITKISTQKKNTERFNIFLDEKYAFSVDADVLVRFDLKKGKELEELDILEIQYGDDVKKAFNRAVEFLSYRMRSEKEV
RDHLKKKETPDMVISEVIHKLYDYSYLNDKEFAEAYASTHKKTNGKGPDVLFRELKAKGIDDDTIKETLSAFTFDEQIQE
ALKHIGKILKKDKKLSTKEIRQRAQMQLQRKGFPFDVINAALEQTEYENDDEAEMEALKAHAEKAIRKYRYDGSYESGMK
VKQYLFRKGFSIDDIDQFLQEEE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=984875 NYE28_RS04330 WP_342490313.1 854465..855256(+) (recX) [Bacillus sp. FSL R5-0443]
ATGCCCTTTATTACAAAAATATCGACCCAAAAGAAAAATACCGAGCGCTTCAACATCTTTCTTGATGAGAAATATGCATT
CAGCGTCGACGCCGACGTGCTTGTGCGTTTTGACCTGAAAAAAGGGAAAGAACTGGAGGAGCTTGACATTCTTGAAATCC
AGTACGGCGATGACGTGAAAAAAGCCTTTAACCGCGCCGTAGAATTTTTATCATACCGGATGCGCTCTGAAAAAGAAGTC
CGGGATCATCTGAAGAAAAAAGAAACACCGGACATGGTCATTTCTGAAGTCATCCATAAACTGTACGATTACAGCTACTT
AAATGACAAAGAATTTGCCGAAGCCTATGCGAGCACCCACAAAAAAACAAACGGCAAAGGCCCTGACGTCCTGTTCCGCG
AGCTGAAAGCGAAAGGAATAGACGACGATACCATCAAGGAGACGCTCAGTGCGTTTACATTTGATGAGCAGATACAAGAA
GCGCTGAAACATATCGGCAAAATCCTGAAAAAAGACAAAAAGCTGTCCACAAAAGAGATCAGACAGCGGGCGCAGATGCA
GCTTCAGCGAAAAGGTTTCCCTTTCGACGTCATCAATGCCGCTCTGGAGCAAACGGAGTATGAGAATGACGATGAAGCCG
AGATGGAAGCTCTGAAGGCTCATGCGGAAAAAGCGATCAGGAAATACCGTTATGACGGCAGTTATGAAAGCGGAATGAAG
GTTAAACAGTACTTATTCAGAAAAGGATTCTCGATTGACGATATTGATCAATTCTTGCAGGAAGAGGAGTAA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-206)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

79.087

100

0.791

Multiple sequence alignment