Detailed information NTG0984874

Bioinformatically predicted

Overview

• Name: rpoS
• Type: Regulator
• Locus tag: ACN9LL_RS07490
• Genome accession: NZ_CP184091
• Coordinates: 1523950..1524942 (-)
• Length: 330 a.a.
• NCBI ID: WP_000081550.1
• Uniprot ID: A0A370V765
• Organism: Escherichia coli strain AZ184
• Function: regulation of chitinases (predicted from homology) Competence regulation

Genomic Context

Location: 1518950..1529942

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACN9LL_RS07470 (ACN9LL_07470)	ygbM	1519588..1520364 (+)	777	WP_420026799.1	HPr family phosphocarrier protein	-
ACN9LL_RS07475 (ACN9LL_07475)	ygbN	1520453..1521817 (+)	1365	WP_000104433.1	GntP family transporter	-
ACN9LL_RS07480 (ACN9LL_07480)	-	1521960..1523003 (-)	1044	WP_001161583.1	MBL fold metallo-hydrolase	-
ACN9LL_RS07485 (ACN9LL_07485)	-	1523228..1523779 (+)	552	WP_001179444.1	flavodoxin family protein	-
ACN9LL_RS07490 (ACN9LL_07490)	rpoS	1523950..1524942 (-)	993	WP_000081550.1	RNA polymerase sigma factor RpoS	Regulator
ACN9LL_RS07495 (ACN9LL_07495)	nlpD	1525005..1526099 (-)	1095	WP_306278776.1	murein hydrolase activator NlpD	-
ACN9LL_RS07500 (ACN9LL_07500)	pcm	1526284..1526910 (-)	627	WP_000254708.1	protein-L-isoaspartate O-methyltransferase	-
ACN9LL_RS07505 (ACN9LL_07505)	surE	1526904..1527665 (-)	762	WP_001295182.1	5'/3'-nucleotidase SurE	-
ACN9LL_RS07510 (ACN9LL_07510)	truD	1527646..1528695 (-)	1050	WP_000568920.1	tRNA pseudouridine(13) synthase TruD	-
ACN9LL_RS07515 (ACN9LL_07515)	ispF	1528692..1529171 (-)	480	WP_001219237.1	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	-
ACN9LL_RS07520 (ACN9LL_07520)	ispD	1529171..1529881 (-)	711	WP_000246149.1	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	-

Sequence

Protein

• Length: 330 a.a.
• Molecular weight: 37972.84 Da
• Isoelectric Point: 4.5597

>NTDB_id=984874 ACN9LL_RS07490 WP_000081550.1 1523950..1524942(-) (rpoS) [Escherichia coli strain AZ184]
MSQNTLKVHDLNEDAEFDENGVEVFDEKALVEEEPSDNDLAEEELLSQGATQRVLDATQLYLGEIGYSPLLTAEEEVYFA
RRALRGDVASRRRMIESNLRLVVKIARRYGNRGLALLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMN
QTRTIRLPIHIVKELNVYLRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVDTPLGGDSEKALLDILAD
EKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGYEAATLEDVGREIGLTRERVRQIQVEGLRRLREILQTQ
GLNIEALFRE

Nucleotide

• Length: 993 bp

>NTDB_id=984874 ACN9LL_RS07490 WP_000081550.1 1523950..1524942(-) (rpoS) [Escherichia coli strain AZ184]
ATGAGTCAGAATACGCTGAAAGTTCATGATTTAAATGAAGATGCGGAATTTGATGAGAACGGAGTTGAGGTTTTTGACGA
AAAGGCCTTAGTAGAAGAGGAACCCAGTGATAACGATTTGGCCGAAGAGGAACTGTTATCGCAGGGAGCCACACAGCGTG
TGCTGGACGCGACTCAGCTTTACCTTGGTGAGATTGGTTATTCACCACTGTTAACGGCCGAAGAAGAAGTTTATTTTGCG
CGTCGCGCACTGCGTGGAGATGTCGCCTCTCGCCGCCGGATGATCGAGAGTAACTTGCGTCTGGTGGTAAAAATTGCCCG
CCGTTATGGCAATCGTGGTCTGGCGTTGCTGGACCTGATCGAAGAGGGCAACCTGGGGCTGATCCGCGCGGTAGAGAAGT
TTGACCCGGAACGTGGTTTCCGCTTCTCAACATACGCAACCTGGTGGATTCGCCAGACGATCGAACGGGCGATTATGAAC
CAAACCCGTACTATTCGTTTGCCGATTCACATCGTAAAGGAGCTGAACGTTTACCTGCGAACCGCACGTGAGTTGTCCCA
TAAGCTGGACCACGAACCAAGTGCGGAAGAGATCGCAGAGCAACTGGATAAGCCAGTTGATGACGTCAGCCGTATGCTTC
GTCTTAACGAGCGCATTACCTCGGTAGACACCCCGCTGGGTGGTGATTCCGAAAAAGCATTGCTGGACATCCTGGCCGAT
GAAAAAGAGAATGGTCCGGAAGATACCACGCAAGATGACGATATGAAGCAGAGCATCGTCAAATGGCTGTTCGAGCTGAA
CGCCAAACAGCGTGAAGTGCTGGCACGTCGATTCGGTTTGCTGGGGTACGAAGCGGCAACACTGGAAGATGTAGGTCGTG
AAATTGGCCTCACCCGTGAACGTGTTCGCCAGATTCAGGTTGAAGGCCTGCGCCGTTTGCGCGAAATCCTGCAAACGCAG
GGGCTGAATATCGAAGCGCTGTTCCGCGAATAA

Domains

Predicted by InterProScan.

• Sigma-70 region 3 (Sigma70_r3) (174-248)

• Sigma-70 region 2 (Sigma70_r2) (94-163)

• Sigma-70 factor, region 1.2 (Sigma70_r1_2) (56-88)

• Sigma-70, region 4 (Sigma70_r4) (262-315)

3D structure

• AlphaFold DB: A0A370V765

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rpoS	Vibrio cholerae O1 biovar El Tor strain E7946	73.065	97.879	0.715