Detailed information NTG0984796

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: NYE68_RS02405
• Genome accession: NZ_CP152012
• Coordinates: 485764..486912 (+)
• Length: 382 a.a.
• NCBI ID: WP_007410270.1
• Uniprot ID: -
• Organism: Bacillus sp. FSL R5-0447
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 480764..491912

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NYE68_RS02385 (NYE68_02385)	-	481161..481844 (-)	684	WP_228903604.1	ABC transporter ATP-binding protein	-
NYE68_RS02390 (NYE68_02390)	-	481859..483295 (-)	1437	WP_228903603.1	ABC transporter permease	-
NYE68_RS02395 (NYE68_02395)	-	483508..484191 (+)	684	WP_007410267.1	response regulator transcription factor	-
NYE68_RS02400 (NYE68_02400)	-	484178..485611 (+)	1434	WP_324636132.1	HAMP domain-containing sensor histidine kinase	-
NYE68_RS02405 (NYE68_02405)	rapC	485764..486912 (+)	1149	WP_007410270.1	Rap family tetratricopeptide repeat protein	Regulator
NYE68_RS02410 (NYE68_02410)	phrC	486896..487015 (+)	120	WP_031378677.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
NYE68_RS02415 (NYE68_02415)	-	487164..487259 (-)	96	WP_012116800.1	YjcZ family sporulation protein	-
NYE68_RS02420 (NYE68_02420)	-	487354..488718 (-)	1365	WP_199022338.1	aspartate kinase	-
NYE68_RS02425 (NYE68_02425)	ceuB	489132..490085 (+)	954	WP_015239156.1	ABC transporter permease	Machinery gene
NYE68_RS02430 (NYE68_02430)	-	490075..491022 (+)	948	WP_014416905.1	iron chelate uptake ABC transporter family permease subunit	-
NYE68_RS02435 (NYE68_02435)	-	491016..491774 (+)	759	WP_003156330.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45475.70 Da
• Isoelectric Point: 4.9916

>NTDB_id=984796 NYE68_RS02405 WP_007410270.1 485764..486912(+) (rapC) [Bacillus sp. FSL R5-0447]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDHMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEET
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=984796 NYE68_RS02405 WP_007410270.1 485764..486912(+) (rapC) [Bacillus sp. FSL R5-0447]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTATCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCATATGGAGCCTGATTCGAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAAGGGCTTCTCGATTATTACGTCAACTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACATATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCACGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTAGAGCAGGACACATATAACGTCCGGATCATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGATTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGC
GAAGCGATTCCGTACTTTGAACGGGCGGTCGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTACACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAACA
ATCAGCGCGTGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAAATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAAGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.461	100	0.825
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568