Detailed information    

insolico Bioinformatically predicted

Overview

Name   comC   Type   Machinery gene
Locus tag   NYE36_RS14270 Genome accession   NZ_CP152011
Coordinates   2884965..2885717 (-) Length   250 a.a.
NCBI ID   WP_012118107.1    Uniprot ID   A7Z796
Organism   Bacillus sp. FSL R5-0593     
Function   processing and translocation of ComGC; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2879965..2890717
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NYE36_RS14245 (NYE36_14245) mreC 2880401..2881264 (-) 864 WP_007408166.1 rod shape-determining protein MreC -
  NYE36_RS14250 (NYE36_14250) mreB 2881295..2882308 (-) 1014 WP_003152647.1 cell shape-determining protein MreB -
  NYE36_RS14255 (NYE36_14255) radC 2882400..2883095 (-) 696 WP_007408165.1 DNA repair protein RadC -
  NYE36_RS14260 (NYE36_14260) - 2883127..2883696 (-) 570 WP_012118105.1 Maf family protein -
  NYE36_RS14265 (NYE36_14265) - 2883837..2884838 (-) 1002 WP_039254352.1 SPOR domain-containing protein -
  NYE36_RS14270 (NYE36_14270) comC 2884965..2885717 (-) 753 WP_012118107.1 A24 family peptidase Machinery gene
  NYE36_RS14275 (NYE36_14275) - 2885857..2887149 (-) 1293 WP_265451135.1 folylpolyglutamate synthase/dihydrofolate synthase family protein -
  NYE36_RS14280 (NYE36_14280) - 2887208..2889850 (-) 2643 WP_265451134.1 valine--tRNA ligase -
  NYE36_RS14285 (NYE36_14285) - 2890303..2890494 (+) 192 WP_003152639.1 hypothetical protein -

Sequence

Protein


Download         Length: 250 a.a.        Molecular weight: 27219.94 Da        Isoelectric Point: 9.4293

>NTDB_id=984766 NYE36_RS14270 WP_012118107.1 2884965..2885717(-) (comC) [Bacillus sp. FSL R5-0593]
MLLILFFLGLIFGSFFYTAACRIPLRISVISPRSACSFCRLPLSWGELVPVVSYILQRGRCRNCRAKLSVMYPAAECWTA
CLFTAAGIHFGFSKELLVALLFLSLLMIVTMTDLQYMLIPDKVLLFFLPLFIAGRMFSPLDSWYAGFAGAVCGFFLLVFI
MFVSKGGIGAGDVKLFGVIGLTLGVKLVLIAFFLSVMIGAVYGMCAAARGRLGKKQPFPFAPAISAGSALSYLYGEELFS
FYIKLASGGA

Nucleotide


Download         Length: 753 bp        

>NTDB_id=984766 NYE36_RS14270 WP_012118107.1 2884965..2885717(-) (comC) [Bacillus sp. FSL R5-0593]
GTGCTTTTGATTCTGTTTTTTCTCGGCTTGATTTTCGGTTCTTTTTTTTATACAGCAGCGTGCCGTATCCCGCTGCGAAT
CTCGGTTATTTCGCCGCGTTCAGCCTGTTCGTTTTGCCGCTTGCCGCTCTCCTGGGGGGAGCTTGTGCCCGTCGTTTCCT
ATATTCTGCAAAGAGGCAGATGCAGAAACTGCCGTGCGAAGCTGTCGGTTATGTATCCGGCGGCGGAATGCTGGACGGCG
TGTTTATTCACGGCTGCAGGCATTCATTTCGGTTTCTCAAAAGAACTGTTAGTCGCGCTGTTATTTCTGTCTCTGCTCAT
GATTGTTACTATGACGGATCTGCAATATATGCTGATTCCTGACAAGGTTCTGCTGTTTTTTCTTCCGCTTTTCATCGCTG
GCCGTATGTTTTCTCCGCTGGATTCATGGTATGCAGGGTTTGCCGGAGCCGTTTGCGGATTTTTTCTGCTTGTTTTTATC
ATGTTTGTCAGTAAAGGAGGCATCGGCGCAGGTGATGTGAAACTGTTTGGGGTGATCGGCCTGACGCTCGGCGTGAAGCT
CGTGCTCATTGCATTCTTTCTTTCCGTTATGATCGGAGCCGTATACGGTATGTGCGCCGCAGCCCGGGGCAGGCTTGGTA
AAAAGCAGCCATTTCCGTTTGCGCCGGCCATCTCAGCCGGGAGCGCTTTGAGTTATTTATACGGTGAAGAGCTGTTTTCG
TTTTACATCAAGCTCGCTTCAGGCGGGGCTTGA

Domains

Predicted by InterproScan.

Bacterial Peptidase A24 N-terminal domain (A24_N_bact)

(8-90)

Type IV leader peptidase family (Peptidase_A24)

(101-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A7Z796

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comC Bacillus subtilis subsp. subtilis str. 168

58.871

99.2

0.584

Multiple sequence alignment