Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   NYE36_RS02045 Genome accession   NZ_CP152011
Coordinates   436950..437903 (+) Length   317 a.a.
NCBI ID   WP_059366593.1    Uniprot ID   -
Organism   Bacillus sp. FSL R5-0593     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 431950..442903
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NYE36_RS02020 (NYE36_02020) - 431996..433429 (+) 1434 WP_165913860.1 HAMP domain-containing sensor histidine kinase -
  NYE36_RS02025 (NYE36_02025) rapC 433582..434730 (+) 1149 WP_007410270.1 Rap family tetratricopeptide repeat protein Regulator
  NYE36_RS02030 (NYE36_02030) phrC 434714..434833 (+) 120 WP_265451313.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  NYE36_RS02035 (NYE36_02035) - 434981..435076 (-) 96 WP_021495118.1 YjcZ family sporulation protein -
  NYE36_RS02040 (NYE36_02040) - 435171..436535 (-) 1365 WP_095352403.1 aspartate kinase -
  NYE36_RS02045 (NYE36_02045) ceuB 436950..437903 (+) 954 WP_059366593.1 ABC transporter permease Machinery gene
  NYE36_RS02050 (NYE36_02050) - 437893..438840 (+) 948 WP_014416905.1 iron chelate uptake ABC transporter family permease subunit -
  NYE36_RS02055 (NYE36_02055) - 438834..439592 (+) 759 WP_003156330.1 ABC transporter ATP-binding protein -
  NYE36_RS02060 (NYE36_02060) - 439614..440558 (+) 945 WP_265451314.1 siderophore ABC transporter substrate-binding protein -
  NYE36_RS02065 (NYE36_02065) - 440600..442024 (-) 1425 WP_007410276.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 34959.26 Da        Isoelectric Point: 9.6741

>NTDB_id=984725 NYE36_RS02045 WP_059366593.1 436950..437903(+) (ceuB) [Bacillus sp. FSL R5-0593]
MKLRYLLLLLAVLACTSIFIGVEDLSPLDIFHLNKEQAGTLFDSRLPRLVSIIIAGMSLSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLMLFTSASPLVKMSIAFVFALAGNFLFMKILERIKFNDAIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNLSSWLQGDFSLVVKGRYELLYLSIPLLIIAYVYADKFTVAGMGESFSVNLGLKYKRVVNIGLIIVSLIASLVILTVGM
LPFLGLIIPNMVSIYKGDNLRSSLPHTALLGAVFVLFCDILGRVIIFPYEISIGLMVGVIGSGIFLYMLLRRKAYES

Nucleotide


Download         Length: 954 bp        

>NTDB_id=984725 NYE36_RS02045 WP_059366593.1 436950..437903(+) (ceuB) [Bacillus sp. FSL R5-0593]
ATGAAGCTACGTTACTTACTTTTGCTACTGGCGGTTTTGGCGTGTACTTCTATATTTATCGGTGTAGAAGATTTGTCGCC
GCTGGATATTTTTCATTTAAATAAAGAACAGGCGGGTACATTGTTTGACAGCCGGCTGCCGCGTTTGGTGAGCATTATCA
TCGCCGGCATGAGCCTGAGCATCTGCGGATTAATCATGCAGCAGATCAGCCGGAATAAATTTGTATCGCCGACGACTGCG
GGAACGATGGATTGGGCAAGGCTCGGAATCTTGATTTCATTAATGCTTTTTACGTCAGCGAGTCCGCTTGTGAAAATGTC
TATCGCTTTCGTTTTCGCGTTGGCGGGAAATTTCCTTTTCATGAAAATTCTCGAGAGAATCAAGTTCAATGATGCGATTT
TTATTCCTCTCGTCGGTTTAATGCTTGGGAACATCGTCAGCTCAATCGCCACGTTTATCGCATATAAATATGACCTGATC
CAAAACCTGTCGTCTTGGCTGCAGGGAGATTTCTCACTGGTCGTCAAAGGCCGGTATGAGCTTTTATATCTGAGTATCCC
GCTTTTGATCATCGCTTATGTGTATGCGGATAAATTTACGGTGGCGGGAATGGGAGAGAGCTTTTCCGTCAATCTCGGCC
TGAAATACAAACGCGTCGTCAATATCGGTCTGATTATCGTGTCGCTCATCGCTTCACTGGTGATCCTGACCGTCGGGATG
CTGCCGTTTCTCGGTTTGATCATTCCCAATATGGTGTCGATTTACAAAGGGGACAACCTGAGGAGCAGCCTGCCTCACAC
CGCTCTGCTGGGCGCTGTTTTTGTGCTGTTTTGCGACATTTTGGGAAGAGTGATTATCTTCCCGTACGAAATTTCCATCG
GCCTGATGGTCGGTGTTATCGGCAGCGGCATCTTCCTGTATATGCTGTTAAGGAGAAAAGCATATGAGTCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

53.797

99.685

0.536

Multiple sequence alignment