Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | MKY18_RS11255 | Genome accession | NZ_CP152010 |
| Coordinates | 2241730..2242065 (+) | Length | 111 a.a. |
| NCBI ID | WP_012010555.1 | Uniprot ID | - |
| Organism | Bacillus sp. FSL R7-0672 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2236730..2247065
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MKY18_RS11235 (MKY18_11235) | gcvT | 2237209..2238306 (-) | 1098 | WP_065098395.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| MKY18_RS11240 (MKY18_11240) | - | 2238867..2240537 (+) | 1671 | WP_065098396.1 | SNF2-related protein | - |
| MKY18_RS11245 (MKY18_11245) | - | 2240552..2241349 (+) | 798 | WP_065098397.1 | YqhG family protein | - |
| MKY18_RS11250 (MKY18_11250) | - | 2241532..2241696 (+) | 165 | WP_003217357.1 | anti-repressor SinI family protein | - |
| MKY18_RS11255 (MKY18_11255) | sinR | 2241730..2242065 (+) | 336 | WP_012010555.1 | transcriptional regulator SinR | Regulator |
| MKY18_RS11260 (MKY18_11260) | - | 2242133..2242933 (-) | 801 | WP_044140977.1 | TasA family protein | - |
| MKY18_RS11265 (MKY18_11265) | - | 2242992..2243564 (-) | 573 | WP_044140976.1 | signal peptidase I | - |
| MKY18_RS11270 (MKY18_11270) | tapA | 2243616..2244143 (-) | 528 | WP_044140975.1 | amyloid fiber anchoring/assembly protein TapA | - |
| MKY18_RS11275 (MKY18_11275) | - | 2244443..2244721 (+) | 279 | WP_065098439.1 | DUF3889 domain-containing protein | - |
| MKY18_RS11280 (MKY18_11280) | - | 2244755..2244949 (-) | 195 | WP_044140973.1 | YqzE family protein | - |
| MKY18_RS11285 (MKY18_11285) | comGG | 2245009..2245392 (-) | 384 | WP_044140972.1 | competence type IV pilus minor pilin ComGG | - |
| MKY18_RS11290 (MKY18_11290) | comGF | 2245389..2245919 (-) | 531 | WP_258395182.1 | competence type IV pilus minor pilin ComGF | - |
| MKY18_RS11295 (MKY18_11295) | comGE | 2245828..2246145 (-) | 318 | WP_044140968.1 | competence type IV pilus minor pilin ComGE | - |
| MKY18_RS11300 (MKY18_11300) | comGD | 2246129..2246575 (-) | 447 | WP_044140967.1 | competence type IV pilus minor pilin ComGD | - |
| MKY18_RS11305 (MKY18_11305) | comGC | 2246568..2246861 (-) | 294 | WP_003217322.1 | competence type IV pilus major pilin ComGC | Machinery gene |
Sequence
Protein
Download Length: 111 a.a. Molecular weight: 13001.59 Da Isoelectric Point: 5.2831
>NTDB_id=984687 MKY18_RS11255 WP_012010555.1 2241730..2242065(+) (sinR) [Bacillus sp. FSL R7-0672]
MIGQRIKQYRNEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLHEKDETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQIWRKKQEEE
MIGQRIKQYRNEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLHEKDETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQIWRKKQEEE
Nucleotide
Download Length: 336 bp
>NTDB_id=984687 MKY18_RS11255 WP_012010555.1 2241730..2242065(+) (sinR) [Bacillus sp. FSL R7-0672]
TTGATTGGCCAGCGTATTAAACAATACCGCAATGAAAAAGGCTACTCACTATCAGAACTGGCCGAAAAGGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAAAGAAACTTGCAAACAAACCCCTCCATTCAATTTCTTGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACACTGTTACACGAAAAAGATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAAAAA
CTAGTTCGAGATGCAATGACATCAGGGGTTTCGAAGAAGCAATTTCGTGAATTTTTAGATTATCAAATCTGGAGAAAAAA
GCAAGAAGAGGAGTAA
TTGATTGGCCAGCGTATTAAACAATACCGCAATGAAAAAGGCTACTCACTATCAGAACTGGCCGAAAAGGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAAAGAAACTTGCAAACAAACCCCTCCATTCAATTTCTTGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACACTGTTACACGAAAAAGATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAAAAA
CTAGTTCGAGATGCAATGACATCAGGGGTTTCGAAGAAGCAATTTCGTGAATTTTTAGATTATCAAATCTGGAGAAAAAA
GCAAGAAGAGGAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
94.595 |
100 |
0.946 |