Detailed information NTG0984675

Bioinformatically predicted

Overview

• Name: clpC
• Type: Regulator
• Locus tag: MKY18_RS06605
• Genome accession: NZ_CP152010
• Coordinates: 1343562..1345670 (-)
• Length: 702 a.a.
• NCBI ID: WP_126741504.1
• Uniprot ID: -
• Organism: Bacillus sp. FSL R7-0672
• Function: degradation of ComX (predicted from homology) Competence regulation

Genomic Context

Location: 1338562..1350670

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MKY18_RS06580 (MKY18_06580)	-	1339152..1339394 (+)	243	WP_065097155.1	aspartyl-phosphate phosphatase Spo0E family protein	-
MKY18_RS06585 (MKY18_06585)	-	1339441..1340946 (-)	1506	WP_065097156.1	ATP-binding protein	-
MKY18_RS06590 (MKY18_06590)	-	1341152..1341607 (+)	456	WP_003211701.1	MarR family transcriptional regulator	-
MKY18_RS06595 (MKY18_06595)	motB	1341637..1342401 (-)	765	WP_126741503.1	flagellar motor protein MotB	-
MKY18_RS06600 (MKY18_06600)	motA	1342394..1343188 (-)	795	WP_003212085.1	flagellar motor stator protein MotA	-
MKY18_RS06605 (MKY18_06605)	clpC	1343562..1345670 (-)	2109	WP_126741504.1	ATP-dependent Clp protease ATP-binding subunit	Regulator
MKY18_RS06610 (MKY18_06610)	-	1345914..1346957 (+)	1044	WP_342497787.1	hypothetical protein	-
MKY18_RS06615 (MKY18_06615)	queC	1347233..1347889 (+)	657	WP_065097160.1	7-cyano-7-deazaguanine synthase QueC	-
MKY18_RS06620 (MKY18_06620)	queD	1347890..1348330 (+)	441	WP_126741506.1	6-carboxytetrahydropterin synthase QueD	-
MKY18_RS06625 (MKY18_06625)	queE	1348323..1349054 (+)	732	WP_126741507.1	7-carboxy-7-deazaguanine synthase QueE	-
MKY18_RS06630 (MKY18_06630)	queF	1349070..1349567 (+)	498	WP_003211403.1	preQ(1) synthase	-
MKY18_RS06635 (MKY18_06635)	-	1349835..1350053 (+)	219	WP_044139792.1	hypothetical protein	-
MKY18_RS06640 (MKY18_06640)	-	1350174..1350362 (-)	189	WP_003211747.1	DUF2187 family protein	-

Sequence

Protein

• Length: 702 a.a.
• Molecular weight: 78200.78 Da
• Isoelectric Point: 5.0378

>NTDB_id=984675 MKY18_RS06605 WP_126741504.1 1343562..1345670(-) (clpC) [Bacillus sp. FSL R7-0672]
MRCQHCQVNEATIRLNMQVNSSRSQMVLCEDCYTSLMEQSKMKMGPQLFGGSSFFSGQEQAGHTQNVEQPKQKGLLDELG
RNLTDGANAGLIDPVIGRDEEVARVIEILNRRNKNNPVLIGEPGVGKTAIAEGLALKIASGDVPNKLKNKQIYLLDVSSL
VANTGIRGQFEERMKQLIKELQSRKNIILFVDEIHLLVGAGSAEGSMDAGNILKPALARGELQLVGATTLKEYRQIEKDA
ALERRFQPVIVDEPTQAEAIEILKGIQDKYESYHGVTYSAEAIQACVQLSSRYIQDRHLPDKAIDLMDEAGSKANLSIDA
ASEDELTNRLTEIAAEKQAALKEEQYEKAAKLRDEEEAIEARLQNKTNDKEHVVTAEDIQAIVEQKTGIPVGKLQADEQT
KMKEIDVRLKARVIGQEHAVEKVAKAVKRSRAGLKSKHRPTGSFLFVGPTGVGKTELSKTLAEELFGSRDAIIRLDMSEY
MEKHSVSKLIGSPPGYVGHDEAGQLTEKVRRKPYSIILLDEIEKAHPDVQHMFLQIMEDGRLTDSQGRTVSFKDTVIIMT
SNAGSTDKTVKVGFQSDQEEAIEEQSLIDSLSAYFKPEFLNRFDSIIQFDSLDRDDLVKIVDLLLNELSEQLKEQNLTVH
VTKEAKEKIAELGYHPAFGARPLRRTIQEHVEDQMTEILLEEEKFSGFTVDVEDNEIVVKKG

Nucleotide

• Length: 2109 bp

>NTDB_id=984675 MKY18_RS06605 WP_126741504.1 1343562..1345670(-) (clpC) [Bacillus sp. FSL R7-0672]
ATGCGTTGTCAACATTGTCAAGTAAATGAAGCAACAATTCGCCTGAATATGCAAGTGAATTCATCCCGGAGCCAAATGGT
TTTATGTGAAGACTGCTACACCTCTTTGATGGAGCAATCAAAAATGAAAATGGGACCTCAATTGTTCGGAGGAAGCTCAT
TCTTCTCTGGGCAAGAGCAAGCAGGACATACGCAAAACGTAGAGCAGCCAAAGCAAAAAGGCTTACTCGATGAACTTGGC
CGCAATTTAACAGATGGCGCAAATGCTGGTTTAATTGATCCAGTCATCGGCCGTGATGAAGAAGTCGCAAGAGTCATTGA
GATTTTAAATAGAAGAAATAAAAACAATCCTGTCCTCATTGGTGAACCAGGTGTTGGGAAAACAGCGATCGCTGAAGGAC
TTGCACTGAAAATTGCAAGTGGCGATGTACCAAATAAATTAAAGAACAAACAAATCTATTTATTAGATGTCTCCTCCCTT
GTAGCGAATACAGGGATACGTGGTCAATTTGAGGAAAGAATGAAGCAGTTAATTAAAGAACTACAAAGCCGTAAAAATAT
TATCTTATTTGTAGATGAAATCCATCTTCTTGTAGGCGCAGGCTCTGCTGAAGGGTCAATGGATGCTGGCAACATTTTAA
AACCAGCTCTTGCACGAGGCGAGCTCCAGCTAGTAGGTGCGACGACATTAAAAGAATATCGTCAAATTGAAAAAGATGCC
GCACTTGAACGACGCTTTCAGCCCGTCATTGTAGATGAGCCAACACAAGCTGAAGCGATCGAGATTTTAAAAGGCATTCA
AGATAAGTACGAAAGCTATCATGGCGTCACCTATTCAGCGGAAGCCATTCAAGCGTGTGTTCAATTATCTTCCCGGTATA
TTCAAGACCGTCATTTGCCGGATAAAGCCATTGATTTAATGGATGAAGCAGGTTCAAAAGCGAACCTCTCCATTGATGCA
GCAAGTGAAGATGAACTAACGAATCGTCTGACAGAAATCGCTGCTGAAAAACAAGCTGCTTTAAAAGAAGAACAATATGA
AAAAGCGGCGAAGCTTCGAGATGAAGAAGAAGCCATTGAAGCAAGACTTCAAAACAAAACAAATGACAAAGAACATGTCG
TCACAGCAGAAGACATTCAAGCCATTGTGGAACAAAAAACAGGCATCCCTGTCGGCAAACTGCAAGCAGACGAACAAACC
AAAATGAAAGAAATTGACGTCCGCTTAAAAGCACGAGTGATCGGCCAGGAACATGCGGTTGAAAAGGTAGCGAAAGCTGT
GAAAAGAAGCAGAGCCGGCTTAAAATCGAAACATAGACCAACTGGCTCCTTCCTTTTCGTTGGACCAACAGGTGTCGGGA
AAACCGAATTGTCGAAAACGCTAGCTGAAGAATTATTTGGTTCAAGAGATGCGATCATCCGTTTAGATATGAGTGAGTAC
ATGGAGAAACACTCAGTATCTAAGCTCATCGGTTCTCCTCCTGGTTACGTTGGACATGATGAAGCAGGCCAGCTGACAGA
AAAAGTGCGCAGAAAACCATACAGCATCATTTTGCTGGATGAAATCGAAAAAGCACATCCTGATGTGCAGCATATGTTCC
TTCAAATCATGGAAGATGGCCGGTTAACAGACAGCCAAGGCAGAACCGTCAGCTTTAAAGATACAGTCATCATCATGACA
AGTAACGCAGGCAGCACAGATAAAACGGTCAAAGTCGGCTTCCAGTCTGATCAGGAAGAAGCGATTGAAGAACAATCACT
CATTGATTCACTCAGCGCCTATTTCAAACCAGAATTTTTGAACCGTTTTGACAGCATCATTCAGTTTGACTCATTAGATC
GAGATGATTTAGTGAAGATTGTGGATCTTCTGCTCAATGAGCTGTCAGAACAATTAAAAGAGCAGAATTTGACAGTCCAT
GTGACAAAAGAAGCGAAAGAAAAAATTGCAGAACTTGGATATCATCCTGCATTTGGTGCTCGTCCACTGCGAAGAACCAT
TCAAGAGCACGTTGAAGATCAAATGACGGAAATATTGCTTGAAGAAGAAAAGTTTTCAGGATTTACTGTAGATGTTGAAG
ATAACGAAATTGTCGTAAAAAAAGGATAG

Domains

Predicted by InterproScan.

• AAA lid domain (AAA_lid_9) (256-355)

• AAA domain (Cdc48 subfamily) (AAA_2) (439-606)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (612-683)

• ATPase family associated with various cellular activities (AAA) (AAA) (118-250)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpC	Lactococcus lactis subsp. cremoris KW2	56.504	100	0.594
clpE	Streptococcus mutans UA159	57.618	100	0.593
clpE	Streptococcus pneumoniae Rx1	55.249	100	0.57
clpE	Streptococcus pneumoniae D39	55.249	100	0.57
clpE	Streptococcus pneumoniae R6	55.249	100	0.57
clpE	Streptococcus pneumoniae TIGR4	55.249	100	0.57
clpC	Bacillus subtilis subsp. subtilis str. 168	53.274	95.726	0.51
clpC	Lactococcus lactis subsp. lactis strain DGCC12653	47.17	90.598	0.427
clpC	Streptococcus thermophilus LMD-9	46.166	91.026	0.42
clpC	Streptococcus thermophilus LMG 18311	46.009	91.026	0.419
clpC	Streptococcus pneumoniae TIGR4	45.223	89.459	0.405
clpC	Streptococcus pneumoniae Rx1	45.425	88.746	0.403
clpC	Streptococcus pneumoniae D39	45.425	88.746	0.403
clpC	Streptococcus mutans UA159	44.603	89.744	0.4