Detailed information    

insolico Bioinformatically predicted

Overview

Name   kpsS   Type   Regulator
Locus tag   ACN9LQ_RS03925 Genome accession   NZ_CP184077
Coordinates   808265..809440 (-) Length   391 a.a.
NCBI ID   WP_139511378.1    Uniprot ID   -
Organism   Escherichia coli strain 1450     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context

Location: 803265..814440
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACN9LQ_RS03915 (ACN9LQ_03915) - 805517..806890 (+) 1374 WP_001546116.1 bifunctional cytidylyltransferase/SDR family oxidoreductase -
  ACN9LQ_RS03920 (ACN9LQ_03920) - 807438..808043 (+) 606 WP_289894506.1 hypothetical protein -
  ACN9LQ_RS03925 (ACN9LQ_03925) kpsS 808265..809440 (-) 1176 WP_139511378.1 capsule biosynthesis protein Regulator
  ACN9LQ_RS03930 (ACN9LQ_03930) - 809475..811502 (-) 2028 WP_001546115.1 capsular polysaccharide biosynthesis protein -
  ACN9LQ_RS03935 (ACN9LQ_03935) kdsB 811499..812239 (-) 741 WP_000030748.1 3-deoxy-manno-octulosonate cytidylyltransferase -
  ACN9LQ_RS03940 (ACN9LQ_03940) - 812249..813925 (-) 1677 WP_001546114.1 polysaccharide biosynthesis/export family protein -

Sequence

Protein


Download         Length: 391 a.a.        Molecular weight: 46444.60 Da        Isoelectric Point: 10.0621

>NTDB_id=984615 ACN9LQ_RS03925 WP_139511378.1 808265..809440(-) (kpsS) [Escherichia coli strain 1450]
MQGNALTVLLSGKKYLLLQGPMGPFFSDVAEWLESLGRNAVNVVFNGGDRFYCRHRHYLAYYQTPKEFPGWLRDLHRQYD
FDTILCFGDCRPLHKEAKRWAKSKGIRFLAFEEGYLRPQFITVEEGGVNAYSSLPRDPDFYRKLPDMPAPHVENLTPSTM
KRIGHAMWYYLIGWHYRHEFPRYRHHKSFSPWYEARCWVRAYWRKQLYKVTQRKVLPRLMNELDQRYYLAVLQVYNDSQI
RNHSNYNDVRDYINEVMYSFSRKAPKESYLVIKHHPMDRGHRLYRPLIKRLSKEYGLGERVIYVHDLPMPELLRHAKAVV
TINSTAGISALIHNKPLKVMGNALYDIKGLTYQGHLHQFWQADFKPDMKLFKKFRGYLLVKTQVNGVYYGG

Nucleotide


Download         Length: 1176 bp        

>NTDB_id=984615 ACN9LQ_RS03925 WP_139511378.1 808265..809440(-) (kpsS) [Escherichia coli strain 1450]
ATGCAAGGTAATGCACTAACCGTTTTATTATCCGGTAAAAAATATCTGCTATTGCAGGGGCCAATGGGACCCTTTTTCAG
TGATGTCGCCGAGTGGCTAGAGTCATTAGGCCGTAACGCTGTGAATGTTGTATTCAACGGCGGGGATCGTTTTTACTGCC
GCCATCGACATTATCTGGCTTACTACCAGACACCGAAAGAGTTTCCCGGATGGTTGCGAGATCTCCACCGGCAATATGAC
TTTGACACTATCCTCTGCTTTGGCGACTGCCGCCCATTGCATAAAGAAGCAAAACGCTGGGCAAAGTCGAAAGGTATCCG
CTTCCTGGCATTTGAAGAAGGATATTTACGCCCGCAATTTATTACTGTTGAAGAAGGCGGAGTGAACGCATATTCATCGC
TACCGCGCGATCCGGATTTTTATCGTAAGTTACCAGATATGCCTGCGCCGCATGTTGAGAACTTAACACCTTCAACAATG
AAACGTATTGGCCATGCGATGTGGTATTACCTGATAGGCTGGCATTACCGTCATGAGTTTCCTCGCTATCGCCATCACAA
ATCATTTTCTCCCTGGTATGAGGCTCGTTGCTGGGTTCGTGCGTACTGGCGCAAGCAACTTTACAAGGTAACACAGCGTA
AGGTATTACCGAGGTTAATGAACGAGTTGGATCAACGTTATTATCTTGCCGTTTTGCAGGTATATAACGATAGCCAGATT
CGTAACCACAGCAATTATAACGATGTACGTGACTATATTAATGAAGTCATGTACTCATTTTCGCGTAAAGCGCCGAAAGA
AAGTTATTTGGTGATCAAACATCATCCGATGGATCGTGGTCACAGACTCTATCGACCATTAATTAAGCGGCTAAGTAAGG
AATATGGCTTAGGTGAGCGAGTCATTTATGTGCACGATCTCCCGATGCCGGAATTATTACGCCACGCAAAAGCGGTGGTG
ACGATTAACAGTACGGCGGGGATCTCTGCGCTGATTCATAACAAACCACTTAAAGTGATGGGCAATGCCCTGTACGACAT
CAAAGGCTTGACGTATCAAGGGCATTTGCACCAGTTCTGGCAGGCTGATTTTAAACCAGATATGAAACTGTTTAAGAAGT
TTCGTGGGTATTTATTGGTGAAGACGCAGGTTAATGGGGTTTATTATGGGGGGTAG

Domains

Predicted by InterProScan.

Capsule polysaccharide biosynthesis protein (Capsule_synth)

(83-389)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kpsS Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

40.103

99.488

0.399

Multiple sequence alignment