Detailed information NTG0984500

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ACN9LN_RS24455
• Genome accession: NZ_CP184060
• Coordinates: 4949577..4950602 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644908.1
• Uniprot ID: -
• Organism: Escherichia coli strain 1447
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4944577..4955602

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACN9LN_RS24435 (ACN9LN_24435)	metJ	4945762..4946079 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
ACN9LN_RS24440 (ACN9LN_24440)	yiiX	4946139..4946747 (+)	609	WP_000702314.1	YiiX family permuted papain-like enzyme	-
ACN9LN_RS24445 (ACN9LN_24445)	rpmE	4946808..4947020 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
ACN9LN_RS24450 (ACN9LN_24450)	priA	4947223..4949421 (+)	2199	WP_001296625.1	primosomal protein N'	Machinery gene
ACN9LN_RS24455 (ACN9LN_24455)	cytR	4949577..4950602 (+)	1026	WP_000644908.1	DNA-binding transcriptional regulator CytR	Regulator
ACN9LN_RS24460 (ACN9LN_24460)	ftsN	4950694..4951653 (+)	960	WP_000068834.1	cell division protein FtsN	-
ACN9LN_RS24465 (ACN9LN_24465)	hslV	4951746..4952276 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ACN9LN_RS24470 (ACN9LN_24470)	hslU	4952286..4953617 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
ACN9LN_RS24475 (ACN9LN_24475)	menA	4953684..4954610 (+)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ACN9LN_RS24480 (ACN9LN_24480)	rraA	4954703..4955188 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ACN9LN_RS24485 (ACN9LN_24485)	zapB	4955273..4955518 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37847.80 Da
• Isoelectric Point: 6.3842

>NTDB_id=984500 ACN9LN_RS24455 WP_000644908.1 4949577..4950602(+) (cytR) [Escherichia coli strain 1447]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSRAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=984500 ACN9LN_RS24455 WP_000644908.1 4949577..4950602(+) (cytR) [Escherichia coli strain 1447]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAGAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGTCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625