Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | MKY77_RS16215 | Genome accession | NZ_CP152003 |
| Coordinates | 3154021..3155091 (-) | Length | 356 a.a. |
| NCBI ID | WP_339146854.1 | Uniprot ID | - |
| Organism | Sutcliffiella sp. FSL R7-0096 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 3149021..3160091
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MKY77_RS16170 (MKY77_16170) | - | 3149247..3149513 (-) | 267 | WP_010194663.1 | phosphocarrier protein HPr | - |
| MKY77_RS16175 (MKY77_16175) | - | 3149925..3150113 (-) | 189 | WP_339146846.1 | YqzE family protein | - |
| MKY77_RS16180 (MKY77_16180) | - | 3150146..3150661 (-) | 516 | WP_339146847.1 | shikimate kinase | - |
| MKY77_RS16185 (MKY77_16185) | comGG | 3151058..3151516 (-) | 459 | WP_339146848.1 | competence type IV pilus minor pilin ComGG | - |
| MKY77_RS16190 (MKY77_16190) | comGF | 3151470..3151916 (-) | 447 | WP_339146849.1 | competence type IV pilus minor pilin ComGF | - |
| MKY77_RS16195 (MKY77_16195) | - | 3151900..3152235 (-) | 336 | WP_339146850.1 | type II secretion system protein | - |
| MKY77_RS16200 (MKY77_16200) | comGD | 3152219..3152677 (-) | 459 | WP_339146851.1 | competence type IV pilus minor pilin ComGD | - |
| MKY77_RS16205 (MKY77_16205) | comGC | 3152667..3152999 (-) | 333 | WP_339146852.1 | competence type IV pilus major pilin ComGC | - |
| MKY77_RS16210 (MKY77_16210) | comGB | 3153000..3154040 (-) | 1041 | WP_339146853.1 | competence type IV pilus assembly protein ComGB | - |
| MKY77_RS16215 (MKY77_16215) | comGA | 3154021..3155091 (-) | 1071 | WP_339146854.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| MKY77_RS16220 (MKY77_16220) | - | 3155532..3156407 (-) | 876 | WP_342515382.1 | serine hydrolase | - |
| MKY77_RS16225 (MKY77_16225) | - | 3156343..3157365 (-) | 1023 | WP_339149839.1 | oligopeptide/dipeptide ABC transporter ATP-binding protein | - |
| MKY77_RS16230 (MKY77_16230) | - | 3157365..3158285 (-) | 921 | WP_339146856.1 | C40 family peptidase | - |
| MKY77_RS16235 (MKY77_16235) | - | 3158278..3159378 (-) | 1101 | WP_339146857.1 | dipeptide epimerase | - |
Sequence
Protein
Download Length: 356 a.a. Molecular weight: 40745.25 Da Isoelectric Point: 8.8573
>NTDB_id=984413 MKY77_RS16215 WP_339146854.1 3154021..3155091(-) (comGA) [Sutcliffiella sp. FSL R7-0096]
MNIEKKCEEIVRQAIGLRVSDIHIKPHEMSAKVLFRLDHYLYDQEELPLPIYERMLSHLKFQAEMDIGETRKPQNGALNL
YIDSKHINLRLSTLPTVNQESLVIRILPHDDSHFPLKRLSLFPNSTRKLFSLMKHSHGLVLFTGPTGSGKTTTLYSILEE
SKGLLQRNIITLEDPVERRSKHVLQVQVNEKAGITYAAGLKAILRHDPDIIMVGEIRDEETAKIAIRAALTGHLVLSTLH
TRDAKGAVHRLLEFGVTQQELEQTLIAISAQRLVQLKCPYCQGECTSFCRKYRHHRLASVYELLYGRELSKVMEECKGEK
VELSYPTLREVIKKGIALGFIHQKEYERWVNDGKGQ
MNIEKKCEEIVRQAIGLRVSDIHIKPHEMSAKVLFRLDHYLYDQEELPLPIYERMLSHLKFQAEMDIGETRKPQNGALNL
YIDSKHINLRLSTLPTVNQESLVIRILPHDDSHFPLKRLSLFPNSTRKLFSLMKHSHGLVLFTGPTGSGKTTTLYSILEE
SKGLLQRNIITLEDPVERRSKHVLQVQVNEKAGITYAAGLKAILRHDPDIIMVGEIRDEETAKIAIRAALTGHLVLSTLH
TRDAKGAVHRLLEFGVTQQELEQTLIAISAQRLVQLKCPYCQGECTSFCRKYRHHRLASVYELLYGRELSKVMEECKGEK
VELSYPTLREVIKKGIALGFIHQKEYERWVNDGKGQ
Nucleotide
Download Length: 1071 bp
>NTDB_id=984413 MKY77_RS16215 WP_339146854.1 3154021..3155091(-) (comGA) [Sutcliffiella sp. FSL R7-0096]
ATGAATATTGAAAAAAAGTGTGAAGAGATTGTTCGCCAAGCTATAGGCTTACGTGTATCAGATATTCACATCAAACCACA
TGAAATGTCCGCCAAAGTACTTTTCCGTCTGGACCACTACCTCTATGACCAAGAAGAACTCCCCCTACCAATCTATGAAC
GGATGCTATCCCACCTTAAATTCCAAGCCGAAATGGATATAGGAGAAACAAGAAAGCCGCAAAATGGCGCCTTAAACCTT
TACATTGACTCCAAACACATCAATCTACGACTCTCGACCTTGCCCACTGTTAACCAAGAAAGCCTTGTCATCAGGATCCT
GCCGCATGATGACAGCCACTTCCCTTTAAAACGTCTATCCTTATTTCCGAATTCTACAAGAAAGCTATTTTCCTTAATGA
AGCATTCACACGGCCTTGTCCTGTTCACCGGACCAACCGGCTCAGGCAAGACCACCACTTTGTATTCCATACTGGAAGAA
TCAAAGGGGTTGTTGCAACGGAATATTATTACGCTTGAGGATCCGGTGGAGCGTAGAAGCAAACATGTTCTGCAGGTGCA
GGTGAATGAAAAGGCTGGAATAACGTACGCGGCAGGTCTAAAGGCAATTCTCAGACATGATCCAGACATTATCATGGTTG
GGGAGATCAGGGATGAAGAAACGGCGAAAATTGCCATAAGGGCAGCATTAACGGGACATTTGGTGTTAAGCACTTTGCAT
ACGCGGGATGCCAAAGGGGCGGTACATCGGCTGTTGGAGTTTGGTGTCACTCAACAGGAGCTGGAACAGACATTGATCGC
TATTTCGGCACAAAGGCTGGTGCAGTTAAAATGTCCATATTGCCAGGGGGAATGTACATCTTTTTGCAGGAAATACAGGC
ATCATCGATTGGCCAGTGTTTATGAACTTTTGTATGGGAGGGAACTGTCCAAGGTGATGGAGGAGTGTAAAGGGGAGAAG
GTGGAATTGAGCTATCCTACTCTGAGGGAAGTGATTAAAAAGGGAATAGCCCTGGGATTCATTCATCAAAAGGAATATGA
AAGATGGGTGAATGATGGCAAGGGGCAATAG
ATGAATATTGAAAAAAAGTGTGAAGAGATTGTTCGCCAAGCTATAGGCTTACGTGTATCAGATATTCACATCAAACCACA
TGAAATGTCCGCCAAAGTACTTTTCCGTCTGGACCACTACCTCTATGACCAAGAAGAACTCCCCCTACCAATCTATGAAC
GGATGCTATCCCACCTTAAATTCCAAGCCGAAATGGATATAGGAGAAACAAGAAAGCCGCAAAATGGCGCCTTAAACCTT
TACATTGACTCCAAACACATCAATCTACGACTCTCGACCTTGCCCACTGTTAACCAAGAAAGCCTTGTCATCAGGATCCT
GCCGCATGATGACAGCCACTTCCCTTTAAAACGTCTATCCTTATTTCCGAATTCTACAAGAAAGCTATTTTCCTTAATGA
AGCATTCACACGGCCTTGTCCTGTTCACCGGACCAACCGGCTCAGGCAAGACCACCACTTTGTATTCCATACTGGAAGAA
TCAAAGGGGTTGTTGCAACGGAATATTATTACGCTTGAGGATCCGGTGGAGCGTAGAAGCAAACATGTTCTGCAGGTGCA
GGTGAATGAAAAGGCTGGAATAACGTACGCGGCAGGTCTAAAGGCAATTCTCAGACATGATCCAGACATTATCATGGTTG
GGGAGATCAGGGATGAAGAAACGGCGAAAATTGCCATAAGGGCAGCATTAACGGGACATTTGGTGTTAAGCACTTTGCAT
ACGCGGGATGCCAAAGGGGCGGTACATCGGCTGTTGGAGTTTGGTGTCACTCAACAGGAGCTGGAACAGACATTGATCGC
TATTTCGGCACAAAGGCTGGTGCAGTTAAAATGTCCATATTGCCAGGGGGAATGTACATCTTTTTGCAGGAAATACAGGC
ATCATCGATTGGCCAGTGTTTATGAACTTTTGTATGGGAGGGAACTGTCCAAGGTGATGGAGGAGTGTAAAGGGGAGAAG
GTGGAATTGAGCTATCCTACTCTGAGGGAAGTGATTAAAAAGGGAATAGCCCTGGGATTCATTCATCAAAAGGAATATGA
AAGATGGGTGAATGATGGCAAGGGGCAATAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
56.98 |
98.596 |
0.562 |