Detailed information    

insolico Bioinformatically predicted

Overview

Name   pepF   Type   Regulator
Locus tag   MKY77_RS07755 Genome accession   NZ_CP152003
Coordinates   1529071..1530885 (+) Length   604 a.a.
NCBI ID   WP_339149653.1    Uniprot ID   -
Organism   Sutcliffiella sp. FSL R7-0096     
Function   degradation of XIP; competence shut-off (predicted from homology)   
Competence regulation

Genomic Context

Location: 1524071..1535885
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MKY77_RS07735 (MKY77_07735) - 1524163..1524825 (-) 663 WP_339149649.1 TerC family protein -
  MKY77_RS07740 (MKY77_07740) mecA 1525359..1526051 (+) 693 WP_339149650.1 adaptor protein MecA -
  MKY77_RS07745 (MKY77_07745) cls 1526153..1527664 (+) 1512 WP_339149651.1 cardiolipin synthase -
  MKY77_RS07750 (MKY77_07750) - 1527801..1528994 (+) 1194 WP_339149652.1 competence protein CoiA family protein -
  MKY77_RS07755 (MKY77_07755) pepF 1529071..1530885 (+) 1815 WP_339149653.1 oligoendopeptidase F Regulator
  MKY77_RS07760 (MKY77_07760) - 1531785..1532657 (-) 873 WP_339149654.1 ClpXP adapter SpxH family protein -
  MKY77_RS07765 (MKY77_07765) - 1532647..1533063 (-) 417 WP_237661564.1 globin -
  MKY77_RS07770 (MKY77_07770) - 1533663..1534346 (-) 684 WP_339149655.1 lytic transglycosylase domain-containing protein -
  MKY77_RS07775 (MKY77_07775) - 1534343..1534954 (-) 612 WP_339149656.1 CYTH domain-containing protein -
  MKY77_RS07780 (MKY77_07780) - 1535324..1535692 (+) 369 WP_339149657.1 hypothetical protein -

Sequence

Protein


Download         Length: 604 a.a.        Molecular weight: 69709.92 Da        Isoelectric Point: 4.6585

>NTDB_id=984404 MKY77_RS07755 WP_339149653.1 1529071..1530885(+) (pepF) [Sutcliffiella sp. FSL R7-0096]
MAEQTAVKKLQERKDISVEDTWRLEDIFSSDEAWEKEFQEVKGMIAKIKDYEGKLSESADTLYEALQYQDSISSRLGKLY
TYAHMRYDQDTTNSFYQGLNDRATNLYTQVASALSFVVPEILTMKEEEIAKFLQEKKELALYEHTLDEINRQRPHVLSAK
EEALLAEASEVLSASSNTFGMLNNADITFPSVKDESGEEVEITHGRYIRFLESEDQEVRKNAFKAVYETYGQYRNTFSST
LGGAVKKDNFQAKVRNYDSARQAALSNNNIPETVYDNLVNTINKNLHLLHRYVDLRKKVLGVEELHMYDLYTPLVKEANM
NVSYEEAKDYLLKGLAPLGQEYLDIVKEGFDNRWVDVQENKGKRSGAYSSGTYGTNPYILMNWQDNVNNLFTLAHEFGHS
VHSYYTRKTQPYPYGNYSIFVAEVASTCNEALLNDYLLKTIDDDKKRLYLLNHYLEGFRGTVFRQTMFAEFEHKIHELAQ
NGEALTADLLTETYYELNKKYFGENITIDEEIGLEWARIPHFYYNYYVYQYATGYSAATALSKQILEEGQPAVDRYLEFL
KAGSSDYPIEVLKKAGVDMTDSNPIEEACKVFEEKLKEMEELLS

Nucleotide


Download         Length: 1815 bp        

>NTDB_id=984404 MKY77_RS07755 WP_339149653.1 1529071..1530885(+) (pepF) [Sutcliffiella sp. FSL R7-0096]
ATGGCGGAACAGACTGCTGTTAAGAAATTACAAGAGCGAAAAGACATTTCTGTGGAAGATACATGGAGATTAGAAGATAT
TTTCTCAAGTGATGAGGCTTGGGAAAAAGAGTTTCAAGAAGTAAAGGGTATGATTGCAAAGATCAAGGATTATGAAGGAA
AGCTATCCGAATCCGCAGATACATTATACGAAGCATTGCAATATCAAGATTCTATTTCCAGCCGATTAGGAAAGCTATAT
ACATATGCTCATATGCGTTATGACCAAGATACGACCAATTCTTTTTACCAGGGATTGAATGATCGAGCGACAAACTTGTA
CACACAAGTGGCAAGTGCCCTATCATTCGTCGTACCTGAAATCCTTACGATGAAGGAAGAGGAAATCGCAAAGTTCCTTC
AAGAAAAGAAAGAGCTAGCTCTATATGAGCATACCTTGGACGAAATCAACCGTCAGCGCCCACACGTGTTATCTGCAAAG
GAAGAAGCGCTTCTTGCTGAAGCATCCGAAGTATTATCTGCTTCCTCCAATACATTCGGCATGCTTAATAATGCCGATAT
CACATTTCCGTCAGTAAAAGACGAGAGTGGGGAAGAAGTAGAAATCACCCACGGCCGTTATATCCGCTTCCTTGAAAGCG
AAGACCAAGAAGTGCGCAAAAATGCATTCAAAGCTGTCTATGAAACATATGGACAGTATCGAAATACGTTCTCGAGCACA
CTTGGTGGGGCTGTGAAAAAAGACAACTTCCAAGCGAAGGTCAGAAACTATGATTCTGCCCGTCAGGCTGCATTAAGCAA
CAATAATATCCCGGAAACGGTCTACGACAACCTGGTGAATACAATCAACAAAAATCTTCACCTGTTGCACCGCTATGTGG
ACCTACGTAAAAAAGTCCTTGGCGTAGAAGAGTTGCATATGTATGACCTTTACACGCCACTTGTCAAAGAGGCGAACATG
AATGTGTCCTATGAAGAGGCGAAGGATTATTTATTGAAAGGCCTTGCACCACTTGGACAAGAATACCTTGATATTGTTAA
AGAAGGCTTTGATAACAGATGGGTGGACGTTCAAGAAAACAAAGGCAAGCGATCTGGTGCATACTCTTCCGGAACATATG
GTACAAATCCATATATCCTGATGAACTGGCAGGACAATGTGAATAACCTATTCACACTTGCCCATGAGTTCGGACATTCC
GTACACAGTTATTACACAAGGAAAACACAACCATACCCGTATGGAAACTACTCTATCTTCGTAGCGGAAGTTGCTTCCAC
TTGTAACGAAGCATTGTTAAATGATTATCTGTTAAAGACAATTGATGACGATAAAAAGCGTCTGTACTTATTGAACCATT
ACCTAGAAGGGTTCCGTGGAACGGTATTCCGTCAAACGATGTTTGCTGAATTTGAGCACAAGATTCATGAGCTTGCTCAA
AATGGCGAAGCATTGACTGCCGACCTGTTAACAGAAACTTACTATGAATTGAACAAGAAATACTTTGGTGAGAACATCAC
GATTGATGAAGAAATCGGATTAGAGTGGGCGAGAATCCCTCACTTCTACTACAATTATTATGTGTACCAATATGCAACAG
GGTACAGTGCAGCAACGGCGCTAAGCAAGCAGATCCTTGAAGAAGGACAGCCGGCCGTTGATCGTTATCTGGAATTCCTA
AAAGCGGGAAGCTCCGATTATCCAATTGAAGTGCTGAAAAAGGCTGGAGTGGACATGACTGATTCTAATCCAATCGAAGA
GGCGTGCAAAGTATTCGAAGAGAAGTTGAAAGAGATGGAAGAGTTGCTTTCCTAA

Domains

Predicted by InterproScan.

Peptidase family M3 (Peptidase_M3)

(211-590)

Oligopeptidase F (Peptidase_M3_N)

(120-189)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pepF Streptococcus salivarius strain HSISS4

50.6

96.523

0.488

Multiple sequence alignment