Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   MKY77_RS07695 Genome accession   NZ_CP152003
Coordinates   1514141..1515103 (+) Length   320 a.a.
NCBI ID   WP_339149642.1    Uniprot ID   -
Organism   Sutcliffiella sp. FSL R7-0096     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1509141..1520103
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MKY77_RS07670 (MKY77_07670) - 1509967..1510911 (+) 945 WP_339149638.1 ATP-binding cassette domain-containing protein -
  MKY77_RS07675 (MKY77_07675) - 1511238..1512446 (+) 1209 WP_339149991.1 putative glycoside hydrolase -
  MKY77_RS07680 (MKY77_07680) - 1512487..1512669 (-) 183 WP_339149639.1 hypothetical protein -
  MKY77_RS07685 (MKY77_07685) - 1512839..1513414 (+) 576 WP_339149640.1 GNAT family N-acetyltransferase -
  MKY77_RS07690 (MKY77_07690) - 1513534..1513977 (+) 444 WP_339149641.1 MarR family winged helix-turn-helix transcriptional regulator -
  MKY77_RS07695 (MKY77_07695) ceuB 1514141..1515103 (+) 963 WP_339149642.1 ABC transporter permease Machinery gene
  MKY77_RS07700 (MKY77_07700) - 1515087..1516043 (+) 957 WP_339149643.1 iron chelate uptake ABC transporter family permease subunit -
  MKY77_RS07705 (MKY77_07705) - 1516031..1516789 (+) 759 WP_339149644.1 ATP-binding cassette domain-containing protein -
  MKY77_RS07710 (MKY77_07710) - 1516951..1517919 (+) 969 WP_339149645.1 siderophore ABC transporter substrate-binding protein -
  MKY77_RS07715 (MKY77_07715) - 1518004..1518735 (-) 732 WP_339149646.1 GDSL-type esterase/lipase family protein -

Sequence

Protein


Download         Length: 320 a.a.        Molecular weight: 35548.01 Da        Isoelectric Point: 10.1789

>NTDB_id=984402 MKY77_RS07695 WP_339149642.1 1514141..1515103(+) (ceuB) [Sutcliffiella sp. FSL R7-0096]
MKKRYLFIILITLSFISLFVGVTEIKAWKLWQGISEQQLQILLLSRIPRLLSIIIAGIGMSVCGLIMQQLTRNKFVSPTT
AGTMDSARLGVLVSLLLFSSAGMLLKASIAFFFALAGTFIFMKILDRIKFKDVIFIPLVGLMFGSIVGSITTFFAYKYDL
IQNMSSWLQGNFSLIIKGRYELLYISVPLLIITYLYANRFTVAGMGEEFSINLGLKYKQVVNIGLVIVAAVTSIVILTVG
MIPFLGLIVPNIVSIFRGDHLKDNLPYTAMIGAIFVLACDILGRIIIYPYEIPIGLTVGVIGSALFLYLLFRRSTYEAKS

Nucleotide


Download         Length: 963 bp        

>NTDB_id=984402 MKY77_RS07695 WP_339149642.1 1514141..1515103(+) (ceuB) [Sutcliffiella sp. FSL R7-0096]
ATGAAGAAAAGGTATCTGTTTATCATACTAATTACATTATCATTTATCTCTTTATTTGTTGGGGTAACCGAAATAAAGGC
ATGGAAATTGTGGCAGGGAATAAGTGAACAGCAACTACAAATTCTTTTGCTGAGCAGAATCCCAAGACTGCTTAGTATTA
TTATCGCTGGTATTGGAATGAGTGTTTGTGGACTGATTATGCAGCAGCTCACTAGGAACAAATTTGTCTCACCAACTACT
GCTGGAACAATGGATTCTGCAAGACTCGGAGTGTTAGTGTCCCTCCTGCTTTTTTCCTCTGCTGGAATGTTACTTAAAGC
TTCCATTGCCTTTTTCTTCGCTTTGGCAGGGACATTCATTTTCATGAAGATTTTAGACAGGATAAAGTTCAAGGACGTAA
TTTTCATCCCTCTTGTGGGGCTGATGTTTGGTAGTATTGTAGGGTCAATCACTACATTTTTTGCCTATAAATACGATCTT
ATTCAGAACATGTCATCATGGTTGCAGGGTAATTTCTCGCTAATCATTAAAGGAAGATATGAGTTACTTTACATAAGTGT
TCCTTTGCTTATAATAACATATCTTTATGCAAACAGATTTACCGTTGCCGGGATGGGAGAAGAGTTCTCCATCAACCTGG
GGCTGAAATATAAACAAGTAGTCAATATTGGCCTTGTCATTGTGGCAGCTGTAACATCTATCGTCATTTTGACTGTTGGA
ATGATTCCATTCCTAGGCCTGATCGTCCCTAATATTGTGAGTATCTTTCGAGGAGATCACTTGAAAGATAACCTGCCATA
TACAGCGATGATTGGAGCAATCTTTGTCCTTGCTTGCGATATTCTAGGAAGAATTATCATTTATCCATACGAAATACCAA
TTGGTCTGACTGTCGGGGTAATAGGTAGTGCGTTATTTCTTTATCTTTTATTTAGGAGAAGTACATATGAAGCTAAATCA
TAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-312)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

51.592

98.125

0.506

Multiple sequence alignment