Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   MKY77_RS07580 Genome accession   NZ_CP152003
Coordinates   1490487..1490675 (+) Length   62 a.a.
NCBI ID   WP_339149622.1    Uniprot ID   -
Organism   Sutcliffiella sp. FSL R7-0096     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1485487..1495675
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MKY77_RS07555 (MKY77_07555) - 1487059..1487241 (-) 183 WP_047971102.1 YjzD family protein -
  MKY77_RS07560 (MKY77_07560) - 1487356..1487493 (+) 138 WP_339149618.1 hypothetical protein -
  MKY77_RS07565 (MKY77_07565) - 1487777..1488517 (+) 741 WP_339149619.1 hypothetical protein -
  MKY77_RS07570 (MKY77_07570) - 1488612..1489376 (+) 765 WP_339149620.1 hypothetical protein -
  MKY77_RS07575 (MKY77_07575) med 1489518..1490471 (+) 954 WP_339149621.1 BMP family ABC transporter substrate-binding protein Regulator
  MKY77_RS07580 (MKY77_07580) comZ 1490487..1490675 (+) 189 WP_339149622.1 ComZ family protein Regulator
  MKY77_RS07585 (MKY77_07585) - 1490901..1491170 (-) 270 WP_339149623.1 hypothetical protein -
  MKY77_RS07590 (MKY77_07590) - 1491533..1492465 (+) 933 WP_339149624.1 beta-ketoacyl-ACP synthase III -
  MKY77_RS07595 (MKY77_07595) fabF 1492515..1493753 (+) 1239 WP_339149989.1 beta-ketoacyl-ACP synthase II -
  MKY77_RS07600 (MKY77_07600) - 1494453..1495235 (+) 783 WP_339149625.1 DUF2268 domain-containing protein -

Sequence

Protein


Download         Length: 62 a.a.        Molecular weight: 7170.28 Da        Isoelectric Point: 4.0543

>NTDB_id=984398 MKY77_RS07580 WP_339149622.1 1490487..1490675(+) (comZ) [Sutcliffiella sp. FSL R7-0096]
MEQDRTMQYMAIAMKYLPEAKQMLDETGLELEPQHIQPLVSLLTKVMDEAYELGKQNALDID

Nucleotide


Download         Length: 189 bp        

>NTDB_id=984398 MKY77_RS07580 WP_339149622.1 1490487..1490675(+) (comZ) [Sutcliffiella sp. FSL R7-0096]
ATGGAACAAGATAGAACCATGCAATATATGGCAATAGCTATGAAATACTTACCAGAAGCAAAACAGATGCTTGATGAAAC
AGGGTTAGAGCTAGAGCCGCAACATATTCAGCCATTGGTCTCTCTATTGACCAAAGTGATGGACGAAGCATACGAACTGG
GAAAACAAAATGCATTAGATATAGATTAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

51.724

93.548

0.484

Multiple sequence alignment