Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0A   Type   Regulator
Locus tag   MKY11_RS11340 Genome accession   NZ_CP152000
Coordinates   2216208..2217011 (-) Length   267 a.a.
NCBI ID   WP_008342226.1    Uniprot ID   A0A5K1NAR3
Organism   Bacillus sp. FSL W7-1085     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context


Location: 2211208..2222011
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MKY11_RS11325 (MKY11_11325) - 2213424..2213660 (+) 237 WP_017357960.1 DUF2627 domain-containing protein -
  MKY11_RS11330 (MKY11_11330) - 2213694..2214431 (-) 738 WP_274660593.1 glycerophosphodiester phosphodiesterase -
  MKY11_RS11335 (MKY11_11335) - 2214658..2215758 (-) 1101 WP_019743381.1 Rap family tetratricopeptide repeat protein -
  MKY11_RS11340 (MKY11_11340) spo0A 2216208..2217011 (-) 804 WP_008342226.1 sporulation transcription factor Spo0A Regulator
  MKY11_RS11345 (MKY11_11345) spoIVB 2217294..2218571 (-) 1278 WP_007501161.1 SpoIVB peptidase -
  MKY11_RS11350 (MKY11_11350) recN 2218770..2220503 (-) 1734 WP_008342224.1 DNA repair protein RecN Machinery gene
  MKY11_RS11355 (MKY11_11355) argR 2220538..2220987 (-) 450 WP_007501163.1 transcriptional regulator ArgR -
  MKY11_RS11360 (MKY11_11360) - 2221149..2222003 (-) 855 WP_007501164.1 TlyA family RNA methyltransferase -

Sequence


Protein


Download         Length: 267 a.a.        Molecular weight: 29891.41 Da        Isoelectric Point: 6.3918

>NTDB_id=984295 MKY11_RS11340 WP_008342226.1 2216208..2217011(-) (spo0A) [Bacillus sp. FSL W7-1085]
MEKIKVCVADDNRELVGLLTEYIEGQEDMEVLGVAYNGQECLTLFKDKEPDVLLLDIIMPHLDGLAVLERLRENNEMTKQ
PSVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNGTQVSHRSSSIQNSVLRSKPEPKRKNLDASITTI
IHEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTV
SMSKAKPTNSEFIAMVADRLRLEHRAS

Nucleotide


Download         Length: 804 bp        

>NTDB_id=984295 MKY11_RS11340 WP_008342226.1 2216208..2217011(-) (spo0A) [Bacillus sp. FSL W7-1085]
GTGGAGAAAATTAAAGTGTGTGTAGCTGATGACAATCGAGAACTTGTTGGCCTTTTGACAGAGTATATTGAGGGACAGGA
AGATATGGAAGTACTTGGCGTGGCGTATAATGGTCAGGAATGTCTGACATTATTTAAAGATAAAGAGCCCGACGTTCTCC
TCTTAGATATTATCATGCCTCATTTAGACGGTCTTGCTGTACTGGAACGCCTCCGTGAAAACAATGAAATGACCAAACAG
CCAAGTGTCATTATGCTGACGGCTTTCGGACAAGAAGACGTAACGAAAAAAGCAGTCGATTTGGGCGCATCCTATTTCAT
TTTGAAACCATTCGATATGGAAAACCTCGTAGGTCATATTCGTCAAGTCAGTGGAAACGGCACACAAGTCAGCCATCGAT
CTTCATCTATCCAAAACAGTGTCCTTCGCAGCAAACCTGAACCGAAACGTAAGAACTTAGATGCGAGCATTACGACGATT
ATTCATGAGATTGGCGTGCCAGCTCATATTAAAGGCTATTTATACTTAAGAGAAGCCATTTCGATGGTGTACAATGATAT
TGAACTACTCGGCAGTATTACAAAAGTGTTGTACCCAGACATTGCAAAGAAATTTAACACGACAGCCAGCAGGGTAGAAC
GAGCGATTCGTCATGCCATTGAAGTGGCTTGGAGCAGAGGGAATATTGACTCCATTTCGTCACTCTTTGGTTACACAGTC
AGCATGTCAAAAGCCAAACCGACCAATTCCGAATTTATTGCCATGGTGGCTGATCGTCTGCGTTTAGAGCATAGAGCAAG
CTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A5K1NAR3

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

88.06

100

0.884


Multiple sequence alignment