Detailed information    

insolico Bioinformatically predicted

Overview

Name   pepF   Type   Regulator
Locus tag   MKY11_RS05705 Genome accession   NZ_CP152000
Coordinates   1143507..1145333 (+) Length   608 a.a.
NCBI ID   WP_337678309.1    Uniprot ID   -
Organism   Bacillus sp. FSL W7-1085     
Function   degradation of XIP; competence shut-off (predicted from homology)   
Competence regulation

Genomic Context

Location: 1138507..1150333
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MKY11_RS05685 (MKY11_05685) - 1138769..1139434 (-) 666 WP_007499010.1 TerC family protein -
  MKY11_RS05690 (MKY11_05690) mecA 1139699..1140364 (+) 666 WP_008348474.1 adaptor protein MecA Regulator
  MKY11_RS05695 (MKY11_05695) cls 1140450..1141970 (+) 1521 WP_342501930.1 cardiolipin synthase -
  MKY11_RS05700 (MKY11_05700) - 1142132..1143292 (+) 1161 WP_024720123.1 competence protein CoiA family protein -
  MKY11_RS05705 (MKY11_05705) pepF 1143507..1145333 (+) 1827 WP_337678309.1 oligoendopeptidase F Regulator
  MKY11_RS05710 (MKY11_05710) - 1145621..1145794 (-) 174 WP_008348466.1 hypothetical protein -
  MKY11_RS05715 (MKY11_05715) - 1146091..1147002 (-) 912 WP_007499002.1 ClpXP adapter SpxH family protein -
  MKY11_RS05720 (MKY11_05720) - 1146999..1147397 (-) 399 WP_342501931.1 thiol management oxidoreductase -
  MKY11_RS05725 (MKY11_05725) - 1147675..1148439 (-) 765 WP_008348461.1 lytic transglycosylase domain-containing protein -
  MKY11_RS05730 (MKY11_05730) - 1148465..1149040 (-) 576 WP_007498999.1 CYTH domain-containing protein -
  MKY11_RS05735 (MKY11_05735) - 1149258..1149623 (+) 366 WP_008348459.1 hypothetical protein -
  MKY11_RS05740 (MKY11_05740) - 1149657..1150286 (+) 630 WP_008348457.1 GTP pyrophosphokinase family protein -

Sequence

Protein


Download         Length: 608 a.a.        Molecular weight: 70283.90 Da        Isoelectric Point: 5.2150

>NTDB_id=984282 MKY11_RS05705 WP_337678309.1 1143507..1145333(+) (pepF) [Bacillus sp. FSL W7-1085]
MTSQNNNNHLPDRSEVKEENKWRLEDIFESVDSWNKEFEAVKKEIPKLAQFKGKLAHSADVLYEALTFQDQLSEKLGKLY
TYAHMKYDEDTTNSSFQALNDKASNLFTQLSSTSAYIVPEILSIQEDKLQQFILEKEELKLYSHALEEINKERPHILSEE
QEALLAEASEPLSTSSTTFSMFNNADISFPSVKDENGEEKKITHGNFITFLNSDDREVRKNAFKAVYKTYDQYQNTLAST
LSGSIKKDNFYAKVRHYKSAREAALSRNSIPEEVYDNLIDTVHQYLPLLHRYIELRKKVLKLDEVHNYDLYTPLVKDAGM
KLTYDEAKDYMLKGLAPLGEEYVSVLKEGLENRWVDVYENKGKRSGAYSSGSYGTNPYILMNWQNNIDNLFTLAHEFGHS
VHSYYTRKHQPYPYGNYSIFVAEVASTTNEALLGEYLLNHLEDKKQRLYVLNHLLEGFRGTVFRQTMFAEFEHLIHVKAQ
EGEALTPEFMTNLYYDLNKKYFGDGMVVDKEIGLEWTRIPHFYYNYYVYQYATGYSAAQALSKQILEEGKPAVERYTDFL
KAGSSDYPINVLKKAGVDMASKEPIEAACQLFEEKLKEMEELISKTGE

Nucleotide


Download         Length: 1827 bp        

>NTDB_id=984282 MKY11_RS05705 WP_337678309.1 1143507..1145333(+) (pepF) [Bacillus sp. FSL W7-1085]
ATGACTTCACAAAATAACAACAATCATTTACCAGACAGAAGCGAAGTAAAAGAAGAAAACAAATGGCGCCTTGAAGATAT
TTTTGAAAGTGTCGATTCTTGGAATAAGGAATTCGAAGCTGTAAAAAAAGAAATTCCGAAGCTCGCCCAATTTAAAGGCA
AGCTGGCCCATTCTGCTGATGTCTTGTATGAAGCCCTAACATTTCAGGATCAACTTTCTGAAAAACTTGGCAAGCTTTAT
ACATATGCGCACATGAAATACGATGAAGATACAACAAATTCATCATTTCAGGCTTTAAATGATAAAGCATCCAATTTATT
TACACAGCTGTCTAGTACATCTGCCTATATTGTTCCGGAAATTTTATCTATTCAAGAAGATAAGTTGCAGCAATTTATTT
TGGAAAAAGAAGAATTAAAACTTTATTCTCACGCTCTCGAAGAAATTAACAAAGAGCGTCCGCATATTTTAAGTGAGGAG
CAAGAAGCTTTATTAGCTGAAGCCTCTGAACCTTTATCAACATCATCCACTACGTTTAGTATGTTTAATAATGCAGATAT
TTCGTTCCCTTCTGTTAAGGATGAAAATGGAGAAGAAAAGAAAATTACTCATGGCAACTTCATTACCTTTTTAAACAGTG
ATGATCGTGAAGTGAGAAAGAATGCTTTTAAAGCCGTTTATAAAACGTATGATCAATATCAGAATACTTTGGCGTCTACA
CTCAGTGGCTCGATTAAAAAGGATAATTTTTATGCGAAAGTACGTCATTACAAATCTGCAAGAGAAGCAGCGTTATCACG
CAACAGTATTCCTGAAGAAGTGTATGACAATCTAATTGATACAGTTCATCAATATTTACCGTTATTACACCGCTACATTG
AATTGCGTAAAAAGGTATTAAAGCTTGATGAAGTGCACAATTATGACTTGTATACACCATTAGTAAAAGATGCTGGCATG
AAGCTGACCTATGATGAAGCAAAGGATTATATGCTGAAAGGGTTAGCGCCATTAGGAGAAGAATATGTTTCGGTATTAAA
AGAGGGACTCGAAAATCGCTGGGTAGACGTTTATGAGAATAAAGGGAAACGAAGCGGTGCGTATTCTTCTGGAAGCTATG
GTACGAATCCTTATATCTTAATGAACTGGCAAAATAATATTGATAATTTATTTACACTGGCTCATGAATTTGGTCACTCT
GTTCATAGCTACTATACAAGAAAGCATCAGCCATATCCGTACGGAAACTACAGCATTTTTGTAGCGGAAGTAGCTTCTAC
AACAAATGAAGCATTACTAGGTGAATACTTACTGAATCATTTAGAGGACAAAAAGCAGCGCTTGTATGTGCTCAATCATT
TGTTAGAAGGATTTAGAGGGACGGTATTCAGACAAACGATGTTTGCAGAGTTCGAGCACCTGATTCATGTGAAAGCGCAA
GAAGGGGAGGCATTAACGCCAGAGTTTATGACGAACCTGTATTACGACCTGAATAAGAAGTATTTTGGCGACGGTATGGT
TGTGGATAAGGAAATCGGATTAGAATGGACGCGAATTCCGCATTTCTATTACAACTATTATGTGTATCAATATGCGACAG
GCTATAGTGCGGCTCAGGCATTAAGTAAACAAATTTTAGAAGAAGGGAAACCTGCGGTGGAGCGCTATACAGACTTCCTT
AAAGCAGGAAGCTCTGACTATCCAATCAACGTGCTGAAAAAAGCTGGTGTAGATATGGCATCGAAAGAGCCAATTGAGGC
AGCATGTCAATTGTTTGAAGAAAAATTAAAGGAAATGGAAGAGCTCATCTCAAAGACTGGTGAGTAA

Domains

Predicted by InterproScan.

Oligopeptidase F (Peptidase_M3_N)

(120-189)

Peptidase family M3 (Peptidase_M3)

(211-590)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pepF Streptococcus salivarius strain HSISS4

49.327

97.697

0.482

Multiple sequence alignment