Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   MKY11_RS05185 Genome accession   NZ_CP152000
Coordinates   1035362..1036312 (+) Length   316 a.a.
NCBI ID   WP_039167438.1    Uniprot ID   -
Organism   Bacillus sp. FSL W7-1085     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1030362..1041312
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MKY11_RS05165 (MKY11_05165) - 1031600..1032082 (+) 483 WP_138278362.1 hypothetical protein -
  MKY11_RS05170 (MKY11_05170) - 1032113..1033552 (-) 1440 WP_342501909.1 PLP-dependent aminotransferase family protein -
  MKY11_RS05175 (MKY11_05175) - 1033696..1034865 (+) 1170 WP_203144230.1 MFS transporter -
  MKY11_RS05180 (MKY11_05180) - 1034928..1035206 (+) 279 WP_039167440.1 barstar family protein -
  MKY11_RS05185 (MKY11_05185) ceuB 1035362..1036312 (+) 951 WP_039167438.1 ABC transporter permease Machinery gene
  MKY11_RS05190 (MKY11_05190) - 1036305..1037255 (+) 951 WP_045034717.1 iron chelate uptake ABC transporter family permease subunit -
  MKY11_RS05195 (MKY11_05195) - 1037246..1038004 (+) 759 WP_019743341.1 ATP-binding cassette domain-containing protein -
  MKY11_RS05200 (MKY11_05200) - 1038027..1038971 (+) 945 WP_045034716.1 siderophore ABC transporter substrate-binding protein -
  MKY11_RS05205 (MKY11_05205) - 1039309..1040265 (+) 957 WP_007499147.1 LCP family protein -
  MKY11_RS05210 (MKY11_05210) - 1040498..1040932 (-) 435 WP_039167431.1 hypothetical protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34959.31 Da        Isoelectric Point: 9.7475

>NTDB_id=984274 MKY11_RS05185 WP_039167438.1 1035362..1036312(+) (ceuB) [Bacillus sp. FSL W7-1085]
MKLYQLSLLFLCLACASLFVGVQDLSLLQLFHLSDEQMNTLFSSRIPRLMSIVLAGMSLSLCGFIMQSMTRNKFVSPTTA
GTMDWAKLGILTAMLVFTQASPLMKMAIAFLFTLAGNLLFLKILRHIKVNDTIYVPLVGLMFGGIVSSISTFIAYKYDLI
QNVSAWLQGDFSLIVQGRYELLYVSVPLLIIAYLYADRFTVAGMGESFAVNLGLTYKRVMAVGLVIVSMITSVTILTVGM
LPFLGLIIPNIVSIYRGDHLKKSLPHTALLGAIFVLICDVLGRVIIYPYEISVGLMVGIIGSAIFLYMLLRRKRYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=984274 MKY11_RS05185 WP_039167438.1 1035362..1036312(+) (ceuB) [Bacillus sp. FSL W7-1085]
ATGAAGTTGTACCAATTAAGTTTGTTGTTTTTGTGTTTGGCATGTGCGTCGCTGTTTGTCGGGGTACAGGACCTGTCTCT
TTTACAGTTGTTTCATCTATCAGATGAACAAATGAACACCTTATTTTCAAGTCGCATCCCGCGGCTAATGAGTATTGTGC
TTGCTGGCATGAGCCTGAGCTTATGCGGTTTTATCATGCAAAGCATGACGAGAAATAAATTTGTCTCTCCAACGACTGCA
GGAACAATGGATTGGGCCAAGCTGGGTATTTTAACCGCCATGCTTGTTTTTACACAGGCAAGCCCGCTGATGAAAATGGC
GATTGCGTTTTTATTTACGTTAGCTGGCAATCTATTATTCTTAAAAATTTTACGCCATATTAAGGTGAACGATACGATCT
ACGTACCGTTAGTCGGCTTAATGTTTGGCGGAATTGTTAGTTCAATTTCCACGTTTATAGCCTATAAATATGATTTGATC
CAAAACGTATCCGCATGGCTGCAAGGGGATTTTTCTCTTATTGTTCAGGGGCGTTATGAACTGCTCTATGTGAGTGTTCC
TCTATTGATCATCGCGTATTTATATGCTGACCGCTTTACAGTGGCTGGTATGGGTGAGAGCTTTGCCGTCAATTTAGGTT
TAACGTATAAACGTGTCATGGCAGTTGGTTTGGTGATTGTTTCGATGATTACGTCTGTAACGATTTTGACTGTTGGCATG
CTGCCATTCCTCGGCTTAATCATTCCGAATATTGTATCGATCTACCGAGGGGATCACTTGAAAAAGAGCCTGCCGCATAC
GGCTTTATTAGGGGCCATTTTTGTGCTCATATGTGATGTACTCGGACGGGTGATCATTTATCCATATGAAATATCTGTCG
GGCTTATGGTTGGCATCATTGGAAGTGCGATCTTCCTGTACATGTTATTAAGGAGGAAGCGCTATGCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52

94.937

0.494

Multiple sequence alignment