Detailed information    

insolico Bioinformatically predicted

Overview


Name   comK   Type   Regulator
Locus tag   MKY11_RS05155 Genome accession   NZ_CP152000
Coordinates   1029386..1029964 (+) Length   192 a.a.
NCBI ID   WP_041507498.1    Uniprot ID   -
Organism   Bacillus sp. FSL W7-1085     
Function   activate transcription of late competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1024386..1034964
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MKY11_RS05135 (MKY11_05135) - 1024880..1026175 (-) 1296 WP_007497200.1 globin-coupled sensor protein -
  MKY11_RS05140 (MKY11_05140) - 1026267..1027799 (-) 1533 WP_342501908.1 FAD-dependent oxidoreductase -
  MKY11_RS05145 (MKY11_05145) - 1027941..1028801 (+) 861 WP_268356345.1 SDR family oxidoreductase -
  MKY11_RS05150 (MKY11_05150) - 1028866..1029096 (-) 231 WP_003210924.1 IDEAL domain-containing protein -
  MKY11_RS05155 (MKY11_05155) comK 1029386..1029964 (+) 579 WP_041507498.1 competence protein ComK Regulator
  MKY11_RS05160 (MKY11_05160) - 1030108..1031214 (+) 1107 WP_268356343.1 alanine racemase -
  MKY11_RS05165 (MKY11_05165) - 1031600..1032082 (+) 483 WP_138278362.1 hypothetical protein -
  MKY11_RS05170 (MKY11_05170) - 1032113..1033552 (-) 1440 WP_342501909.1 PLP-dependent aminotransferase family protein -
  MKY11_RS05175 (MKY11_05175) - 1033696..1034865 (+) 1170 WP_203144230.1 MFS transporter -

Sequence


Protein


Download         Length: 192 a.a.        Molecular weight: 22349.34 Da        Isoelectric Point: 8.7996

>NTDB_id=984273 MKY11_RS05155 WP_041507498.1 1029386..1029964(+) (comK) [Bacillus sp. FSL W7-1085]
MSGISETPLDSYVINQTTMAVLPVEEGKRVYSKVIERETSFYVELKPLQIIERSCRFFGSSYAGRKAGTYEVTGISHKPP
IVIDSSNHLYFFPTYSSNRPQCGWISHKYIHNFQESSLGDTVVTFTNEQSVKLDVSYKSFESQVHRTAYLRTKFQDRLDG
GLPKKQEFMLYPKEQQLNLVYDFILRELRNRY

Nucleotide


Download         Length: 579 bp        

>NTDB_id=984273 MKY11_RS05155 WP_041507498.1 1029386..1029964(+) (comK) [Bacillus sp. FSL W7-1085]
GTGTCAGGAATTAGTGAAACACCATTAGATTCATACGTCATTAATCAAACAACAATGGCGGTCCTTCCGGTTGAAGAAGG
AAAACGAGTATATTCAAAAGTGATCGAAAGAGAGACAAGCTTTTACGTTGAATTAAAGCCGCTGCAAATTATAGAACGCA
GTTGCAGGTTCTTTGGCTCAAGCTATGCAGGCAGAAAAGCGGGAACATATGAAGTAACAGGTATTTCCCACAAGCCTCCC
ATCGTGATTGACTCATCCAATCATCTGTATTTCTTCCCAACCTATTCATCCAACCGCCCTCAATGCGGATGGATCTCCCA
CAAATACATTCATAACTTTCAGGAATCATCCCTCGGAGATACGGTTGTTACTTTTACAAATGAGCAATCGGTCAAACTAG
ATGTCTCATATAAGTCATTTGAGAGTCAGGTACACCGAACAGCGTATCTCCGAACGAAATTTCAAGATCGACTTGATGGA
GGTCTTCCTAAGAAACAAGAATTTATGCTGTATCCAAAGGAACAGCAGCTCAACCTTGTGTATGATTTTATCTTAAGAGA
ACTTCGTAATCGTTATTAG

Domains


Predicted by InterproScan.

(10-158)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comK Bacillus subtilis subsp. subtilis str. 168

61.458

100

0.615


Multiple sequence alignment