Detailed information    

insolico Bioinformatically predicted

Overview

Name   nucA/comI   Type   Machinery gene
Locus tag   MKY11_RS01940 Genome accession   NZ_CP152000
Coordinates   364208..364636 (-) Length   142 a.a.
NCBI ID   WP_007498233.1    Uniprot ID   A0AAU7FLT6
Organism   Bacillus sp. FSL W7-1085     
Function   cleavage of dsDNA into ssDNA (predicted from homology)   
DNA processing

Genomic Context

Location: 359208..369636
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MKY11_RS01910 (MKY11_01910) - 359352..359681 (+) 330 WP_017366586.1 YckD family protein -
  MKY11_RS01915 (MKY11_01915) - 359728..360492 (-) 765 WP_342501777.1 MBL fold metallo-hydrolase -
  MKY11_RS01920 (MKY11_01920) - 360608..361027 (+) 420 WP_024718958.1 Lrp/AsnC family transcriptional regulator -
  MKY11_RS01925 (MKY11_01925) - 361052..361858 (+) 807 WP_259254051.1 AAC(3) family N-acetyltransferase -
  MKY11_RS01930 (MKY11_01930) comJ 361860..362246 (-) 387 WP_039166300.1 competence protein ComJ -
  MKY11_RS01935 (MKY11_01935) - 362384..364081 (-) 1698 WP_342501778.1 methyl-accepting chemotaxis protein -
  MKY11_RS01940 (MKY11_01940) nucA/comI 364208..364636 (-) 429 WP_007498233.1 NucA/NucB deoxyribonuclease domain-containing protein Machinery gene
  MKY11_RS01945 (MKY11_01945) - 365005..367074 (+) 2070 WP_274660770.1 hydantoinase/oxoprolinase family protein -
  MKY11_RS01950 (MKY11_01950) - 367064..369049 (+) 1986 WP_342501779.1 hydantoinase B/oxoprolinase family protein -

Sequence

Protein


Download         Length: 142 a.a.        Molecular weight: 15926.90 Da        Isoelectric Point: 6.4881

>NTDB_id=984267 MKY11_RS01940 WP_007498233.1 364208..364636(-) (nucA/comI) [Bacillus sp. FSL W7-1085]
MKLLKTILLLLLIVIGIATGYVQLGQHKQETTNSSYDKTIHFPSDRYPETAKHIEEAIDEGHSSICTIDRKNSDEQRDKS
LHGIPTKRGYDRDEWPMAMCKEGGAGASVKYVRPSDNRGAGSWVSHQLSDDPDGTRIQFIIE

Nucleotide


Download         Length: 429 bp        

>NTDB_id=984267 MKY11_RS01940 WP_007498233.1 364208..364636(-) (nucA/comI) [Bacillus sp. FSL W7-1085]
ATGAAACTTCTTAAAACCATTCTCTTGCTTTTATTGATTGTCATTGGTATAGCGACAGGCTATGTCCAACTAGGGCAACA
TAAACAAGAGACGACAAACTCTTCTTATGACAAAACCATTCACTTTCCATCAGATCGTTATCCAGAAACTGCGAAGCACA
TAGAAGAAGCTATTGACGAAGGTCATTCTTCCATTTGCACCATTGATCGGAAAAATAGTGATGAGCAAAGAGACAAATCA
CTTCATGGCATTCCAACAAAGCGTGGTTATGATCGTGATGAATGGCCAATGGCGATGTGTAAAGAAGGTGGAGCAGGGGC
TTCTGTCAAATATGTACGTCCTTCGGATAATAGGGGGGCAGGCTCTTGGGTAAGTCATCAATTATCAGATGATCCTGATG
GCACAAGAATCCAATTTATTATCGAGTAG

Domains

Predicted by InterproScan.

Deoxyribonuclease NucA/NucB (DNase_NucA_NucB)

(46-136)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nucA/comI Bacillus subtilis subsp. subtilis str. 168

68.224

75.352

0.514

Multiple sequence alignment