Detailed information NTG0984248

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ACN9LF_RS24615
• Genome accession: NZ_CP184040
• Coordinates: 4942604..4943629 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644908.1
• Uniprot ID: -
• Organism: Escherichia coli strain 1438
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4937604..4948629

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACN9LF_RS24595 (ACN9LF_24595)	metJ	4938789..4939106 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
ACN9LF_RS24600 (ACN9LF_24600)	yiiX	4939166..4939774 (+)	609	WP_000702314.1	YiiX family permuted papain-like enzyme	-
ACN9LF_RS24605 (ACN9LF_24605)	rpmE	4939835..4940047 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
ACN9LF_RS24610 (ACN9LF_24610)	priA	4940250..4942448 (+)	2199	WP_001296625.1	primosomal protein N'	Machinery gene
ACN9LF_RS24615 (ACN9LF_24615)	cytR	4942604..4943629 (+)	1026	WP_000644908.1	DNA-binding transcriptional regulator CytR	Regulator
ACN9LF_RS24620 (ACN9LF_24620)	ftsN	4943721..4944680 (+)	960	WP_000068834.1	cell division protein FtsN	-
ACN9LF_RS24625 (ACN9LF_24625)	hslV	4944773..4945303 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ACN9LF_RS24630 (ACN9LF_24630)	hslU	4945313..4946644 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
ACN9LF_RS24635 (ACN9LF_24635)	menA	4946711..4947637 (+)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ACN9LF_RS24640 (ACN9LF_24640)	rraA	4947730..4948215 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ACN9LF_RS24645 (ACN9LF_24645)	zapB	4948300..4948545 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37847.80 Da
• Isoelectric Point: 6.3842

>NTDB_id=984248 ACN9LF_RS24615 WP_000644908.1 4942604..4943629(+) (cytR) [Escherichia coli strain 1438]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSRAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=984248 ACN9LF_RS24615 WP_000644908.1 4942604..4943629(+) (cytR) [Escherichia coli strain 1438]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAGAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGTCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625