Detailed information    

insolico Bioinformatically predicted

Overview

Name   pepF   Type   Regulator
Locus tag   MKX67_RS08345 Genome accession   NZ_CP151998
Coordinates   1617810..1619633 (+) Length   607 a.a.
NCBI ID   WP_342489123.1    Uniprot ID   -
Organism   Cytobacillus sp. FSL W7-1323     
Function   degradation of XIP; competence shut-off (predicted from homology)   
Competence regulation

Genomic Context

Location: 1612810..1624633
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MKX67_RS08320 (MKX67_08320) - 1613177..1613362 (-) 186 WP_095369797.1 hypothetical protein -
  MKX67_RS08325 (MKX67_08325) - 1613604..1614179 (+) 576 WP_095369796.1 GNAT family N-acetyltransferase -
  MKX67_RS08330 (MKX67_08330) spxA 1614737..1615132 (+) 396 WP_095369795.1 transcriptional regulator SpxA -
  MKX67_RS08335 (MKX67_08335) mecA 1615797..1616447 (+) 651 WP_095369794.1 adaptor protein MecA -
  MKX67_RS08340 (MKX67_08340) - 1616549..1617694 (+) 1146 WP_342489122.1 competence protein CoiA family protein -
  MKX67_RS08345 (MKX67_08345) pepF 1617810..1619633 (+) 1824 WP_342489123.1 oligoendopeptidase F Regulator
  MKX67_RS08350 (MKX67_08350) - 1620288..1621160 (-) 873 WP_095369791.1 ClpXP adapter SpxH family protein -
  MKX67_RS08355 (MKX67_08355) - 1621157..1621564 (-) 408 WP_095369790.1 globin -
  MKX67_RS08360 (MKX67_08360) - 1621841..1622488 (-) 648 WP_342489124.1 lytic transglycosylase domain-containing protein -
  MKX67_RS08365 (MKX67_08365) - 1622513..1623103 (-) 591 WP_322909173.1 CYTH domain-containing protein -
  MKX67_RS08370 (MKX67_08370) - 1623266..1623640 (+) 375 WP_342489125.1 hypothetical protein -
  MKX67_RS08375 (MKX67_08375) - 1623755..1624393 (+) 639 WP_095369786.1 GTP pyrophosphokinase family protein -

Sequence

Protein


Download         Length: 607 a.a.        Molecular weight: 69993.81 Da        Isoelectric Point: 4.8632

>NTDB_id=984158 MKX67_RS08345 WP_342489123.1 1617810..1619633(+) (pepF) [Cytobacillus sp. FSL W7-1323]
MANDSTVKKLPTRKEVPVEETWRLEDIFSSDDEWNKEFNEVKELSKEAGKFKGMLHEGAKVLYDVLQYQDHLLSRIVKLF
TYARMRYDQDTTNATYQSLDDKIKGLYSVVASELAFIVPEILAIDENQLAQYIAEKEELKMYEHALEEINLQRPHVLTAE
KEALLAQASEVMDASSNTFGMLNNADLTFPSIKNEEGEEVEVTHGRFINFLESDDQRVRRDAFRAMYTTYGQFRNTFAST
LSGNVKRNNFNAKVRNYQSARHAALSANNIPESVYDQLVSTINDHLHLLHRYVKLRKKVLQLDELHMYDLYTPLVKDVKM
AITYDEAKKLMIEGLAPLGEEYCSILEEGLQNRWVDVWENKGKRSGAYSSGAYGTNPYILLNWQDNINNLFTLTHEFGHS
VHSYYTRKSQPYAYGDYSIFVAEVASTCNEALLNDHLLKTIDDDKKRLFLLNHFLEGFRGTVFRQTMFAEFEHEIHQMAQ
NNEALTADALTEKYYELNKKYFGGEDIIIDEEIGLEWSRIPHFYYDYYVYQYATGYSAATALSEQILTEGKPAVDRFIGF
LKAGSSDYPIEVLKKAGVDMTSSEPIKAACKVFEEKLNEMEQLLETI

Nucleotide


Download         Length: 1824 bp        

>NTDB_id=984158 MKX67_RS08345 WP_342489123.1 1617810..1619633(+) (pepF) [Cytobacillus sp. FSL W7-1323]
ATGGCTAACGATTCTACAGTTAAGAAACTACCAACAAGAAAAGAGGTACCAGTTGAAGAAACTTGGCGTCTTGAAGATAT
TTTTTCAAGTGACGATGAATGGAATAAAGAATTTAATGAAGTAAAAGAGTTATCTAAAGAAGCAGGCAAGTTTAAAGGGA
TGTTGCATGAAGGTGCAAAGGTTCTTTATGATGTTTTACAATATCAAGATCACTTACTTTCTCGTATTGTGAAGCTCTTT
ACATATGCAAGAATGAGATATGATCAAGATACAACAAATGCAACGTATCAAAGTTTAGATGATAAAATCAAAGGGCTGTA
TTCAGTGGTTGCTAGTGAACTTGCTTTCATAGTGCCAGAAATTCTTGCCATTGATGAAAATCAATTAGCACAGTATATAG
CCGAGAAAGAAGAATTAAAAATGTATGAACATGCACTTGAAGAAATCAATCTTCAACGTCCTCATGTACTTACAGCGGAA
AAAGAAGCTTTACTTGCACAAGCATCAGAAGTAATGGATGCATCAAGTAATACTTTTGGAATGTTAAATAATGCTGATTT
AACATTCCCATCGATTAAAAACGAAGAGGGAGAAGAGGTTGAAGTGACACACGGTCGATTTATCAACTTCCTAGAGAGTG
ATGATCAGCGTGTACGTCGAGATGCTTTTCGTGCGATGTATACAACCTATGGACAGTTTCGTAATACATTCGCTAGTACG
TTAAGTGGAAATGTGAAAAGAAATAATTTCAATGCAAAGGTACGAAACTATCAATCAGCTCGACATGCCGCTTTATCAGC
GAATAATATACCAGAATCTGTTTATGATCAATTAGTAAGCACGATTAATGATCATCTTCATTTGCTTCATCGATATGTGA
AACTAAGGAAAAAAGTTTTGCAATTAGATGAATTGCACATGTATGATCTCTACACACCTTTAGTAAAGGATGTAAAAATG
GCGATTACTTATGATGAAGCCAAAAAGCTAATGATTGAAGGCTTAGCTCCTTTAGGTGAGGAATATTGCAGTATTTTGGA
AGAGGGTCTACAGAATCGCTGGGTGGATGTTTGGGAGAATAAAGGGAAGAGAAGTGGTGCCTATTCTTCTGGTGCTTATG
GTACGAATCCTTATATCCTCCTTAATTGGCAAGATAATATCAATAACCTCTTCACATTAACACATGAATTTGGTCATTCT
GTTCATAGTTATTACACACGTAAGTCGCAACCATATGCTTATGGTGATTATTCCATTTTTGTGGCTGAAGTAGCATCAAC
TTGTAATGAGGCGTTATTAAATGATCATTTATTAAAAACGATTGATGATGATAAAAAACGTTTATTCTTACTCAATCATT
TCTTAGAAGGGTTTAGAGGAACAGTATTCCGTCAAACGATGTTTGCAGAATTTGAGCATGAGATTCACCAAATGGCTCAA
AATAATGAAGCTTTAACAGCAGATGCACTTACTGAAAAGTATTATGAACTGAACAAGAAATACTTTGGTGGTGAGGATAT
CATTATTGATGAGGAAATTGGATTAGAATGGTCAAGAATCCCTCACTTCTATTACGATTATTATGTATACCAATATGCTA
CCGGTTATAGTGCTGCAACGGCTTTAAGTGAGCAAATTTTAACAGAAGGAAAACCGGCAGTTGATCGCTTTATTGGTTTC
CTTAAAGCAGGTAGTTCTGATTACCCGATAGAAGTGCTTAAAAAAGCGGGTGTGGATATGACAAGTTCAGAACCGATTAA
GGCAGCATGTAAAGTGTTTGAAGAAAAGTTAAATGAGATGGAACAATTGTTAGAAACGATTTAA

Domains

Predicted by InterproScan.

Oligopeptidase F (Peptidase_M3_N)

(120-189)

Peptidase family M3 (Peptidase_M3)

(211-590)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pepF Streptococcus salivarius strain HSISS4

50.426

96.705

0.488

Multiple sequence alignment