Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   MKX67_RS02165 Genome accession   NZ_CP151998
Coordinates   408968..409924 (+) Length   318 a.a.
NCBI ID   WP_095370865.1    Uniprot ID   -
Organism   Cytobacillus sp. FSL W7-1323     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 403968..414924
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MKX67_RS02145 (MKX67_02145) - 404580..405683 (+) 1104 WP_095370869.1 dipeptide epimerase -
  MKX67_RS02150 (MKX67_02150) - 405673..406602 (+) 930 WP_095370868.1 C40 family peptidase -
  MKX67_RS02155 (MKX67_02155) - 406592..407608 (+) 1017 WP_251162953.1 dipeptide ABC transporter ATP-binding protein -
  MKX67_RS02160 (MKX67_02160) - 407605..408387 (+) 783 WP_095370866.1 serine hydrolase -
  MKX67_RS02165 (MKX67_02165) ceuB 408968..409924 (+) 957 WP_095370865.1 ABC transporter permease Machinery gene
  MKX67_RS02170 (MKX67_02170) - 409911..410867 (+) 957 WP_095370864.1 iron chelate uptake ABC transporter family permease subunit -
  MKX67_RS02175 (MKX67_02175) - 410864..411634 (+) 771 WP_095370863.1 ABC transporter ATP-binding protein -
  MKX67_RS02180 (MKX67_02180) - 411983..413005 (+) 1023 WP_095370862.1 siderophore ABC transporter substrate-binding protein -
  MKX67_RS02185 (MKX67_02185) - 413372..413950 (-) 579 WP_095370861.1 TetR/AcrR family transcriptional regulator -
  MKX67_RS02190 (MKX67_02190) - 414150..414884 (+) 735 WP_095370860.1 glucose 1-dehydrogenase -

Sequence

Protein


Download         Length: 318 a.a.        Molecular weight: 35149.46 Da        Isoelectric Point: 9.1602

>NTDB_id=984142 MKX67_RS02165 WP_095370865.1 408968..409924(+) (ceuB) [Cytobacillus sp. FSL W7-1323]
MRIWMLICAAIVLSFISLFIGAIDIKPMDLLDWESDETQIFLISRVPRLIAIILAGAGMSIAGLIMQSLSRNKFVSPTTA
GTLDAAKLGIMISMLFFTNVTYTQQVLFSFAFALVGTMVFMQILDRIKFKDVIFVPLIGIMYGNILSSITTFFAYEADIL
QNISSWLMGSFTLVISGRYELLYVSIPVFILAYLYANKFTVAGMGEEFAKNLGLSYKWVLNIGLILVAIIATTVVLTVGV
IPFLGLIVPNIVSLYMGDNLRKTIPHTALLGVVFLLICDIIGRIVIHPYEIPVNVTVAVIGSVIFLIMLFRGRAYAKK

Nucleotide


Download         Length: 957 bp        

>NTDB_id=984142 MKX67_RS02165 WP_095370865.1 408968..409924(+) (ceuB) [Cytobacillus sp. FSL W7-1323]
ATGAGAATATGGATGTTAATCTGTGCAGCTATAGTCCTGTCATTTATATCACTATTTATCGGTGCGATTGATATTAAACC
AATGGATTTGCTAGATTGGGAGTCTGATGAAACACAAATTTTCCTGATTAGTCGTGTACCTAGATTAATAGCGATTATTT
TAGCTGGTGCAGGAATGAGTATTGCTGGATTGATTATGCAAAGTTTGAGCAGGAATAAATTTGTTTCTCCGACAACCGCG
GGAACGTTAGATGCTGCTAAACTAGGTATTATGATTTCCATGCTATTTTTTACAAACGTAACGTATACCCAGCAAGTTCT
TTTTAGTTTTGCCTTTGCGCTTGTCGGTACGATGGTATTTATGCAAATACTTGATCGTATCAAATTTAAAGATGTTATAT
TTGTTCCTCTTATTGGAATAATGTACGGGAATATTTTGTCTTCTATTACCACTTTCTTTGCGTATGAAGCTGATATCCTG
CAAAATATATCTTCATGGTTAATGGGGAGTTTTACTTTAGTAATCTCGGGCCGATATGAACTTTTATATGTAAGTATCCC
AGTTTTCATTTTGGCTTATTTATATGCTAATAAATTTACCGTTGCAGGTATGGGAGAAGAATTTGCGAAAAATTTAGGAT
TGAGCTATAAGTGGGTTTTAAATATTGGTCTCATCCTTGTTGCTATCATTGCTACGACTGTTGTACTAACTGTCGGTGTC
ATTCCGTTCTTAGGCTTAATTGTACCTAATATCGTGTCTCTGTATATGGGAGATAATCTCCGAAAAACGATTCCACATAC
GGCTCTTTTAGGCGTTGTGTTCTTATTAATTTGTGATATTATTGGGCGCATTGTGATCCACCCTTATGAGATACCGGTGA
ACGTAACAGTTGCGGTAATCGGTAGTGTCATCTTCTTAATTATGTTATTTAGGGGGAGAGCATATGCGAAAAAATAG

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

53.797

99.371

0.535

Multiple sequence alignment