Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0A   Type   Regulator
Locus tag   NSQ70_RS11050 Genome accession   NZ_CP151992
Coordinates   2176464..2177267 (-) Length   267 a.a.
NCBI ID   WP_008342226.1    Uniprot ID   A0A5K1NAR3
Organism   Bacillus sp. FSL R5-0397     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context


Location: 2171464..2182267
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSQ70_RS11035 (NSQ70_11035) - 2173680..2173916 (+) 237 WP_017357960.1 DUF2627 domain-containing protein -
  NSQ70_RS11040 (NSQ70_11040) - 2173950..2174687 (-) 738 WP_024718886.1 glycerophosphodiester phosphodiesterase -
  NSQ70_RS11045 (NSQ70_11045) - 2174914..2176014 (-) 1101 WP_019743381.1 Rap family tetratricopeptide repeat protein -
  NSQ70_RS11050 (NSQ70_11050) spo0A 2176464..2177267 (-) 804 WP_008342226.1 sporulation transcription factor Spo0A Regulator
  NSQ70_RS11055 (NSQ70_11055) spoIVB 2177550..2178827 (-) 1278 WP_342502159.1 SpoIVB peptidase -
  NSQ70_RS11060 (NSQ70_11060) recN 2179026..2180759 (-) 1734 WP_342473342.1 DNA repair protein RecN Machinery gene
  NSQ70_RS11065 (NSQ70_11065) argR 2180794..2181243 (-) 450 WP_007501163.1 transcriptional regulator ArgR -

Sequence


Protein


Download         Length: 267 a.a.        Molecular weight: 29891.41 Da        Isoelectric Point: 6.3918

>NTDB_id=983925 NSQ70_RS11050 WP_008342226.1 2176464..2177267(-) (spo0A) [Bacillus sp. FSL R5-0397]
MEKIKVCVADDNRELVGLLTEYIEGQEDMEVLGVAYNGQECLTLFKDKEPDVLLLDIIMPHLDGLAVLERLRENNEMTKQ
PSVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNGTQVSHRSSSIQNSVLRSKPEPKRKNLDASITTI
IHEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTV
SMSKAKPTNSEFIAMVADRLRLEHRAS

Nucleotide


Download         Length: 804 bp        

>NTDB_id=983925 NSQ70_RS11050 WP_008342226.1 2176464..2177267(-) (spo0A) [Bacillus sp. FSL R5-0397]
GTGGAGAAAATTAAAGTGTGTGTAGCTGATGACAATCGAGAACTTGTTGGCCTTTTGACAGAGTATATTGAGGGACAGGA
AGATATGGAAGTACTTGGCGTGGCGTATAATGGTCAGGAATGTCTGACATTATTTAAAGATAAAGAGCCCGACGTTCTCC
TCTTAGATATTATCATGCCTCATTTAGACGGTCTTGCTGTACTGGAACGCCTCCGTGAAAACAATGAAATGACCAAACAG
CCAAGTGTCATTATGCTGACGGCTTTCGGACAAGAAGACGTAACGAAAAAAGCAGTCGATTTGGGCGCATCCTATTTCAT
TTTGAAACCATTCGATATGGAAAACCTCGTAGGTCATATTCGTCAAGTCAGTGGAAACGGCACACAAGTCAGCCATCGAT
CTTCATCTATCCAAAACAGTGTCCTTCGCAGCAAACCTGAACCGAAACGTAAGAACTTAGATGCGAGCATTACGACGATT
ATTCATGAGATTGGCGTGCCAGCTCATATTAAAGGCTATTTATACTTAAGAGAAGCCATTTCGATGGTGTACAATGATAT
TGAACTACTCGGCAGTATTACAAAAGTGTTGTACCCAGACATTGCAAAGAAATTTAACACGACAGCCAGCAGGGTAGAAC
GAGCGATTCGTCATGCCATTGAAGTGGCTTGGAGCAGAGGGAATATTGACTCCATTTCGTCACTCTTTGGTTACACAGTC
AGCATGTCAAAAGCCAAACCGACCAATTCCGAATTTATTGCCATGGTGGCTGATCGTCTGCGTTTAGAGCATAGAGCAAG
CTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A5K1NAR3

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

88.06

100

0.884


Multiple sequence alignment