Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   NSQ70_RS05240 Genome accession   NZ_CP151992
Coordinates   1053071..1054021 (+) Length   316 a.a.
NCBI ID   WP_017366964.1    Uniprot ID   A0A9X0FWU4
Organism   Bacillus sp. FSL R5-0397     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1048071..1059021
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSQ70_RS05220 (NSQ70_05220) - 1049305..1049787 (+) 483 WP_008348662.1 hypothetical protein -
  NSQ70_RS05225 (NSQ70_05225) - 1049818..1051257 (-) 1440 WP_342502494.1 PLP-dependent aminotransferase family protein -
  NSQ70_RS05230 (NSQ70_05230) - 1051401..1052570 (+) 1170 WP_081114756.1 MFS transporter -
  NSQ70_RS05235 (NSQ70_05235) - 1052633..1052911 (+) 279 WP_178897193.1 barstar family protein -
  NSQ70_RS05240 (NSQ70_05240) ceuB 1053071..1054021 (+) 951 WP_017366964.1 ABC transporter permease Machinery gene
  NSQ70_RS05245 (NSQ70_05245) - 1054014..1054964 (+) 951 WP_045034717.1 iron chelate uptake ABC transporter family permease subunit -
  NSQ70_RS05250 (NSQ70_05250) - 1054955..1055713 (+) 759 WP_019743341.1 ATP-binding cassette domain-containing protein -
  NSQ70_RS05255 (NSQ70_05255) - 1055736..1056680 (+) 945 WP_342502495.1 siderophore ABC transporter substrate-binding protein -
  NSQ70_RS05260 (NSQ70_05260) - 1057018..1057974 (+) 957 WP_007499147.1 LCP family protein -
  NSQ70_RS05265 (NSQ70_05265) - 1058009..1058443 (-) 435 WP_039167431.1 hypothetical protein -
  NSQ70_RS05270 (NSQ70_05270) - 1058529..1058891 (-) 363 WP_017360224.1 hypothetical protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34945.28 Da        Isoelectric Point: 9.7475

>NTDB_id=983904 NSQ70_RS05240 WP_017366964.1 1053071..1054021(+) (ceuB) [Bacillus sp. FSL R5-0397]
MKLYQLSLLFVCLACASLFVGVQDLSLLQLFHLSDEQMNTLFSSRIPRLMSIVLAGMSLSLCGFIMQSMTRNKFVSPTTA
GTMDWAKLGILTAMLVFTQASPLMKMAIAFLFTLAGNLLFLKILRHIKVNDTIYVPLVGLMFGGIVSSISTFIAYKYDLI
QNVSAWLQGDFSLIVQGRYELLYVSVPLLIIAYLYADRFTVAGMGESFAVNLGLTYKRVMAVGLVIVSMITSVTILTVGM
LPFLGLIIPNIVSIYRGDHLKKSLPHTALLGAIFVLICDVLGRVIIYPYEISVGLMVGIIGSAIFLYMLLRRKRYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=983904 NSQ70_RS05240 WP_017366964.1 1053071..1054021(+) (ceuB) [Bacillus sp. FSL R5-0397]
ATGAAGTTGTACCAATTAAGTTTGTTGTTTGTGTGTTTGGCATGTGCGTCGCTGTTTGTCGGAGTACAGGACCTGTCTCT
TTTACAGTTGTTTCATCTATCAGATGAACAAATGAACACCTTATTTTCAAGTCGCATCCCGCGGCTGATGAGTATTGTGC
TTGCTGGCATGAGCCTGAGCTTATGCGGTTTTATCATGCAAAGCATGACGAGAAATAAATTTGTCTCTCCAACGACTGCA
GGAACAATGGATTGGGCCAAGCTGGGTATTTTAACCGCTATGCTTGTTTTTACACAGGCAAGCCCGCTGATGAAAATGGC
GATTGCGTTTTTATTTACGTTAGCTGGCAATCTATTATTCTTAAAAATTCTACGCCATATTAAGGTGAACGATACGATCT
ACGTACCGTTAGTCGGCTTAATGTTTGGCGGAATTGTTAGTTCAATTTCCACGTTTATAGCCTATAAATATGATTTGATC
CAAAACGTATCCGCATGGCTGCAAGGGGATTTTTCTCTTATTGTTCAGGGGCGTTATGAACTGCTCTATGTGAGTGTTCC
TCTATTGATCATCGCGTATTTATATGCTGACCGCTTTACAGTGGCTGGTATGGGTGAGAGCTTTGCCGTCAATTTAGGTT
TAACGTATAAACGTGTCATGGCAGTTGGTTTGGTGATTGTTTCGATGATTACGTCTGTAACGATTTTGACTGTTGGCATG
CTGCCATTCCTCGGCTTAATCATTCCGAATATTGTATCGATCTACCGAGGGGATCACTTGAAAAAGAGCCTGCCGCATAC
GGCTTTATTAGGGGCCATTTTTGTGCTCATATGTGACGTGCTCGGAAGGGTGATCATTTATCCATATGAAATATCTGTTG
GGCTTATGGTCGGCATCATTGGAAGTGCGATCTTCCTGTACATGTTATTAAGGAGGAAGCGCTATGCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52

94.937

0.494

Multiple sequence alignment